Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10382 and 10383 overlap by 10 nucleotides10383 and 10384 are separated by 73 nucleotides10384 and 10385 are separated by 756 nucleotides10385 and 10386 are separated by 703 nucleotides mRNA_2014: 10382 - K20697 GNBP1 gram-negative bacteria-binding protein 1, at 745,416 to 747,550 10382 mRNA_2015: 10383 - Hypothetical Protein, at 747,541 to 748,131 10383 mRNA_2016: 10384 - HMMPfam-Glycosyl transferase family group 2-PF13632,SUPERFAMILY--SSF53448, at 748,205 to 751,738 10384 mRNA_2017: 10385 - K12600 SKI3, TTC37 superkiller protein 3, at 752,495 to 757,859 10385 mRNA_2018: 10386 - K09554 CDC37 cell division cycle protein 37, at 758,563 to 760,344 10386
Group Condition mRNA_2014 mRNA_2015 mRNA_2016 mRNA_2017 mRNA_2018
10382 10383 10384 10385 10386
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.2 -0.3 -0.9 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.0 -0.2 -1.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.1 -0.1 -1.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.1 -0.4 -0.7 N.D.
growth on ypd YPD +0.1 -0.2 +0.0 -0.8 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.0 -0.1 -0.3 N.D.
auxotrophy Dropout Complete +0.5 -0.1 +0.1 -1.0 N.D.
auxotrophy YNB Glucose +0.3 +0.0 +0.1 -0.9 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.1 -0.1 -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.1 +0.1 -0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.1 +0.2 -0.3 N.D.
growth on oleic acid YNB Glucose +0.1 -0.1 +0.2 -0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.2 +0.1 -0.7 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 -0.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.0 +0.1 -0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.3 +0.1 +0.2 -0.5 N.D.
growth on oleic acid YNB Oleic Acid +0.0 -0.2 +0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.0 +0.1 -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 +0.0 +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.1 +0.3 -0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.4 -0.1 +0.8 N.D.
remove
mRNA_2014
plot
remove
mRNA_2015
plot
remove
mRNA_2016
remove
mRNA_2017
plot
remove
mRNA_2018
plot