Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10384 and 10385 are separated by 756 nucleotides10385 and 10386 are separated by 703 nucleotides10386 and 10387 are separated by 280 nucleotides10387 and 10388 are separated by 146 nucleotides mRNA_2016: 10384 - HMMPfam-Glycosyl transferase family group 2-PF13632,SUPERFAMILY--SSF53448, at 748,205 to 751,738 10384 mRNA_2017: 10385 - K12600 SKI3, TTC37 superkiller protein 3, at 752,495 to 757,859 10385 mRNA_2018: 10386 - K09554 CDC37 cell division cycle protein 37, at 758,563 to 760,344 10386 mRNA_2019: 10387 - K07088 K07088 uncharacterized protein, at 760,625 to 762,571 10387 mRNA_2020: 10388 - KOG1703 Adaptor protein Enigma and related PDZ-LIM proteins, at 762,718 to 765,022 10388
Group Condition mRNA_2016 mRNA_2017 mRNA_2018 mRNA_2019 mRNA_2020
10384 10385 10386 10387 10388
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -1.3 N.D. +0.7 -0.7
growth on ypd YPD +0.0 -0.8 N.D. +0.1 -0.3
auxotrophy Dropout Complete +0.1 -1.0 N.D. -0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.7 N.D. +0.0 +0.2
growth on ricinoleic acid YNB Glucose +0.2 -0.5 N.D. -0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.3 N.D. -0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.9 N.D. +0.4 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.3 N.D. -0.4 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.2 N.D. -0.4 -0.3
auxotrophy YNB Glucose +0.1 -0.9 N.D. -0.2 +0.4
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.7 N.D. -0.2 +0.3
growth on oleic acid YNB Glucose +0.2 -0.4 N.D. -0.4 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 N.D. -0.3 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -1.0 N.D. +0.4 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.2 N.D. -0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.5 N.D. -0.1 +0.5
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.2 N.D. -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 N.D. +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.1 N.D. +0.1 +0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.2 N.D. -0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.8 N.D. +0.7 -0.2
remove
mRNA_2016
plot
remove
mRNA_2017
plot
remove
mRNA_2018
remove
mRNA_2019
plot
remove
mRNA_2020
plot