Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10384 and 10385 are separated by 756 nucleotides
10385 and 10386 are separated by 703 nucleotides
10386 and 10387 are separated by 280 nucleotides
10387 and 10388 are separated by 146 nucleotides
mRNA_2016: 10384 - HMMPfam-Glycosyl transferase family group 2-PF13632,SUPERFAMILY--SSF53448, at 748,205 to 751,738
10384
mRNA_2017: 10385 - K12600 SKI3, TTC37 superkiller protein 3, at 752,495 to 757,859
10385
mRNA_2018: 10386 - K09554 CDC37 cell division cycle protein 37, at 758,563 to 760,344
10386
mRNA_2019: 10387 - K07088 K07088 uncharacterized protein, at 760,625 to 762,571
10387
mRNA_2020: 10388 - KOG1703 Adaptor protein Enigma and related PDZ-LIM proteins, at 762,718 to 765,022
10388
Group
Condition
mRNA
_2016
mRNA
_2017
mRNA
_2018
mRNA
_2019
mRNA
_2020
10384
10385
10386
10387
10388
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-1.3
N.D.
+0.7
-0.7
growth on ypd
YPD
+0.0
-0.8
N.D.
+0.1
-0.3
auxotrophy
Dropout Complete
+0.1
-1.0
N.D.
-0.2
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.7
N.D.
+0.0
+0.2
growth on ricinoleic acid
YNB Glucose
+0.2
-0.5
N.D.
-0.4
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.3
N.D.
-0.4
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.9
N.D.
+0.4
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.3
N.D.
-0.4
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
-0.2
N.D.
-0.4
-0.3
auxotrophy
YNB Glucose
+0.1
-0.9
N.D.
-0.2
+0.4
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.7
N.D.
-0.2
+0.3
growth on oleic acid
YNB Glucose
+0.2
-0.4
N.D.
-0.4
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.1
N.D.
-0.3
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-1.0
N.D.
+0.4
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.2
N.D.
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.5
N.D.
-0.1
+0.5
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.2
N.D.
-0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.1
N.D.
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.1
N.D.
+0.1
+0.1
growth on oleic acid
YNB Oleic Acid
+0.1
+0.2
N.D.
-0.0
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.8
N.D.
+0.7
-0.2
remove
mRNA_2016
plot
remove
mRNA_2017
plot
remove
mRNA_2018
remove
mRNA_2019
plot
remove
mRNA_2020
plot