Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10385 and 10386 are separated by 703 nucleotides10386 and 10387 are separated by 280 nucleotides10387 and 10388 are separated by 146 nucleotides10388 and 10389 are separated by 398 nucleotides mRNA_2017: 10385 - K12600 SKI3, TTC37 superkiller protein 3, at 752,495 to 757,859 10385 mRNA_2018: 10386 - K09554 CDC37 cell division cycle protein 37, at 758,563 to 760,344 10386 mRNA_2019: 10387 - K07088 K07088 uncharacterized protein, at 760,625 to 762,571 10387 mRNA_2020: 10388 - KOG1703 Adaptor protein Enigma and related PDZ-LIM proteins, at 762,718 to 765,022 10388 mRNA_2021: 10389 - BLAST deacetylase-like protein [Drechmeria coniospora], at 765,421 to 766,356 10389
Group Condition mRNA_2017 mRNA_2018 mRNA_2019 mRNA_2020 mRNA_2021
10385 10386 10387 10388 10389
facs on lipid accumulation Sorted High BODIPY Gate -1.3 N.D. +0.7 -0.7 -1.7
auxotrophy YNB Glucose 75mM Methionine -0.7 N.D. -0.2 +0.3 -2.0
auxotrophy Dropout Complete -1.0 N.D. -0.2 +0.2 -1.0
auxotrophy YNB Glucose -0.9 N.D. -0.2 +0.4 -1.2
auxotrophy YNB Glucose 75mM Arginine -0.5 N.D. -0.1 +0.5 -1.2
facs on lipid accumulation Sorted No BODIPY Gate -0.7 N.D. +0.0 +0.2 -0.6
growth on oleic acid YNB Glucose -0.4 N.D. -0.4 +0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.0 N.D. +0.4 +0.3 -0.9
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 N.D. +0.4 +0.0 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. -0.4 +0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.5 N.D. -0.4 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. -0.3 -0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. -0.4 -0.3 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. -0.4 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.1 +0.1 -0.3
growth on ypd YPD -0.8 N.D. +0.1 -0.3 +0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. -0.1 +0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. -0.1 -0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. +0.1 +0.1 +0.2
growth on oleic acid YNB Oleic Acid +0.2 N.D. -0.0 +0.1 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.8 N.D. +0.7 -0.2 -0.2
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