Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10387 and 10388 are separated by 146 nucleotides10388 and 10389 are separated by 398 nucleotides10389 and 10390 are separated by 271 nucleotides10390 and 10391 are separated by 203 nucleotides mRNA_2019: 10387 - K07088 K07088 uncharacterized protein, at 760,625 to 762,571 10387 mRNA_2020: 10388 - KOG1703 Adaptor protein Enigma and related PDZ-LIM proteins, at 762,718 to 765,022 10388 mRNA_2021: 10389 - BLAST deacetylase-like protein [Drechmeria coniospora], at 765,421 to 766,356 10389 mRNA_2022: 10390 - BLAST KLLA0F09339p [Kluyveromyces lactis], at 766,628 to 767,371 10390 mRNA_2023: 10391 - K04718 SPHK sphingosine kinase, at 767,575 to 770,006 10391
Group Condition mRNA_2019 mRNA_2020 mRNA_2021 mRNA_2022 mRNA_2023
10387 10388 10389 10390 10391
facs on lipid accumulation Sorted High BODIPY Gate +0.7 -0.7 -1.7 -0.4 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.3 -2.0 +0.0 -0.0
auxotrophy Dropout Complete -0.2 +0.2 -1.0 -0.3 -0.3
growth on oleic acid YNB Glucose -0.4 +0.1 -0.4 -0.1 -0.5
auxotrophy YNB Glucose -0.2 +0.4 -1.2 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.5 -1.2 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.0 -0.1 -0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.2 -0.6 +0.1 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 -0.2 -0.2 -0.1 -0.4
growth on oleic acid YNB Oleic Acid -0.0 +0.1 +0.4 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 -0.3 +0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.0 +0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.0 -0.4 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 +0.3 -0.9 -0.2 +0.5
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.1 -0.1 +0.2 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.1 +0.0 +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.1 +0.4 +0.1 +0.3
growth on ricinoleic acid YNB Glucose -0.4 -0.1 +0.4 +0.3 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.3 +0.4 +0.2 +0.5
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 +0.2 +0.2 -0.1
growth on ypd YPD +0.1 -0.3 +0.7 +0.1 +0.2
remove
mRNA_2019
plot
remove
mRNA_2020
plot
remove
mRNA_2021
remove
mRNA_2022
plot
remove
mRNA_2023
plot