Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10389 and 10390 are separated by 271 nucleotides10390 and 10391 are separated by 203 nucleotides10391 and 10392 are separated by 173 nucleotides10392 and 10393 are separated by 390 nucleotides mRNA_2021: 10389 - BLAST deacetylase-like protein [Drechmeria coniospora], at 765,421 to 766,356 10389 mRNA_2022: 10390 - BLAST KLLA0F09339p [Kluyveromyces lactis], at 766,628 to 767,371 10390 mRNA_2023: 10391 - K04718 SPHK sphingosine kinase, at 767,575 to 770,006 10391 mRNA_2024: 10392 - K15979 SND1 staphylococcal nuclease domain-containing protein 1, at 770,180 to 773,514 10392 mRNA_2025: 10393 - SUPERFAMILY--SSF53474, at 773,905 to 776,623 10393
Group Condition mRNA_2021 mRNA_2022 mRNA_2023 mRNA_2024 mRNA_2025
10389 10390 10391 10392 10393
auxotrophy YNB Glucose 75mM Methionine -2.0 +0.0 -0.0 -0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -1.7 -0.4 -0.3 -0.2 +0.0
auxotrophy Dropout Complete -1.0 -0.3 -0.3 -0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine -1.2 -0.2 +0.1 -0.4 -0.3
auxotrophy YNB Glucose -1.2 -0.1 -0.2 -0.3 -0.3
growth on oleic acid YNB Glucose -0.4 -0.1 -0.5 -0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.0 +0.1 -0.3 -0.3
growth on oleic acid YNB Oleic Acid +0.4 -0.3 -0.2 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.9 -0.2 +0.5 -0.1 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.1 -0.4 +0.2 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.6 +0.1 +0.0 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 +0.2 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.1 +0.3 -0.6 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.1 +0.1 +0.0 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.1 +0.1 -0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.2 -0.1 +0.2 -0.5
growth on ricinoleic acid YNB Glucose +0.4 +0.3 +0.2 -0.5 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.2 +0.4 +0.2 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 +0.2 +0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 +0.2 +0.5 -0.6 -0.1
growth on ypd YPD +0.7 +0.1 +0.2 -0.0 +0.2
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