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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10391 and 10392 are separated by 173 nucleotides
10392 and 10393 are separated by 390 nucleotides
10393 and 10394 are separated by 314 nucleotides
10394 and 10395 are separated by 307 nucleotides
mRNA_2023: 10391 - K04718 SPHK sphingosine kinase, at 767,575 to 770,006
10391
mRNA_2024: 10392 - K15979 SND1 staphylococcal nuclease domain-containing protein 1, at 770,180 to 773,514
10392
mRNA_2025: 10393 - SUPERFAMILY--SSF53474, at 773,905 to 776,623
10393
mRNA_2026: 10394 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 776,938 to 779,956
10394
mRNA_2027: 10395 - K07208 RHEB Ras homolog enriched in brain, at 780,264 to 781,182
10395
Group
Condition
mRNA
_2023
mRNA
_2024
mRNA
_2025
mRNA
_2026
mRNA
_2027
10391
10392
10393
10394
10395
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.3
-0.3
-0.9
N.D.
growth on oleic acid
YNB Oleic Acid
-0.2
-0.2
-0.3
-0.2
N.D.
growth on oleic acid
YNB Glucose
-0.5
-0.3
-0.2
-0.0
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.6
-0.4
-0.3
N.D.
auxotrophy
Dropout Complete
-0.3
-0.2
-0.3
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.4
-0.3
-0.1
N.D.
auxotrophy
YNB Glucose
-0.2
-0.3
-0.3
-0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.2
+0.0
-0.3
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
+0.2
+0.0
-0.5
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.2
-0.5
-0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.2
-0.3
+0.0
N.D.
growth on ricinoleic acid
YNB Glucose
+0.2
-0.5
-0.2
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.2
-0.1
-0.3
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
-0.6
-0.1
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.2
-0.2
+0.0
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.4
+0.2
-0.4
-0.4
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.3
-0.2
-0.3
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.2
-0.0
-0.1
N.D.
growth on ypd
YPD
+0.2
-0.0
+0.2
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.0
+0.0
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.5
-0.1
+0.1
-0.0
N.D.
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