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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10393 and 10394 are separated by 314 nucleotides
10394 and 10395 are separated by 307 nucleotides
10395 and 10396 are separated by 958 nucleotides
10396 and 10397 are separated by 1135 nucleotides
mRNA_2025: 10393 - SUPERFAMILY--SSF53474, at 773,905 to 776,623
10393
mRNA_2026: 10394 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 776,938 to 779,956
10394
mRNA_2027: 10395 - K07208 RHEB Ras homolog enriched in brain, at 780,264 to 781,182
10395
mRNA_2028: 10396 - HMMPfam-TENA/THI-4/PQQC family-PF03070,SUPERFAMILY--SSF48613, at 782,141 to 783,596
10396
mRNA_2029: 10397 - K07088 K07088 uncharacterized protein, at 784,732 to 786,233
10397
Group
Condition
mRNA
_2025
mRNA
_2026
mRNA
_2027
mRNA
_2028
mRNA
_2029
10393
10394
10395
10396
10397
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.9
N.D.
-0.4
+0.1
growth on oleic acid
YNB Oleic Acid
-0.3
-0.2
N.D.
-0.2
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.1
N.D.
-0.3
-0.3
auxotrophy
YNB Glucose
-0.3
-0.1
N.D.
-0.3
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-0.3
N.D.
-0.2
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.3
N.D.
-0.1
-0.1
auxotrophy
Dropout Complete
-0.3
-0.1
N.D.
-0.0
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.0
N.D.
-0.3
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.5
-0.3
N.D.
-0.3
+0.4
ypd buoyancy
40 hrs High Buoyancy
-0.4
-0.4
N.D.
-0.3
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.1
N.D.
-0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.3
N.D.
-0.1
+0.2
growth on ricinoleic acid
YNB Glucose
-0.2
-0.0
N.D.
-0.1
-0.1
growth on oleic acid
YNB Glucose
-0.2
-0.0
N.D.
+0.0
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.2
N.D.
+0.1
-0.0
growth on ypd
YPD
+0.2
-0.1
N.D.
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
-0.5
N.D.
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.0
N.D.
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.3
N.D.
+0.5
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.0
N.D.
+0.3
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.2
N.D.
+0.3
+0.3
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