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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10395 and 10396 are separated by 958 nucleotides
10396 and 10397 are separated by 1135 nucleotides
10397 and 10398 are separated by 288 nucleotides
10398 and 10399 are separated by 5302 nucleotides
mRNA_2027: 10395 - K07208 RHEB Ras homolog enriched in brain, at 780,264 to 781,182
10395
mRNA_2028: 10396 - HMMPfam-TENA/THI-4/PQQC family-PF03070,SUPERFAMILY--SSF48613, at 782,141 to 783,596
10396
mRNA_2029: 10397 - K07088 K07088 uncharacterized protein, at 784,732 to 786,233
10397
mRNA_2030: 10398 - KOG2260 Cell division cycle 37 protein, CDC37, at 786,522 to 787,329
10398
mRNA_2031: 10399 - BLAST TPR-like protein [Auricularia subglabra TFB-10046..., at 792,632 to 792,952
10399
Group
Condition
mRNA
_2027
mRNA
_2028
mRNA
_2029
mRNA
_2030
mRNA
_2031
10395
10396
10397
10398
10399
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.2
-0.4
-0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.3
-0.3
-0.1
+0.2
auxotrophy
YNB Glucose
N.D.
-0.3
-0.3
-0.1
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.1
-0.1
-0.1
-0.1
auxotrophy
Dropout Complete
N.D.
-0.0
-0.4
-0.1
+0.3
growth on oleic acid
YNB Oleic Acid
N.D.
-0.2
-0.4
+0.1
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
-0.1
-0.1
+0.0
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.3
-0.2
+0.0
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.1
+0.3
-0.2
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.3
+0.4
-0.1
-0.0
growth on ypd
YPD
N.D.
-0.1
-0.1
+0.4
-0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.1
+0.2
-0.0
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.2
-0.1
+0.4
+0.2
growth on oleic acid
YNB Glucose
N.D.
+0.0
-0.1
+0.0
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
-0.0
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.5
-0.0
-0.2
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.4
+0.1
+0.4
+0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.3
+0.4
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.3
+0.0
-0.0
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.1
+0.3
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.3
+0.3
+0.1
+0.1
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