Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10397 and 10398 are separated by 288 nucleotides10398 and 10399 are separated by 5302 nucleotides10399 and 10400 are separated by 1867 nucleotides10400 and 10401 are separated by 674 nucleotides mRNA_2029: 10397 - K07088 K07088 uncharacterized protein, at 784,732 to 786,233 10397 mRNA_2030: 10398 - KOG2260 Cell division cycle 37 protein, CDC37, at 786,522 to 787,329 10398 mRNA_2031: 10399 - BLAST TPR-like protein [Auricularia subglabra TFB-10046..., at 792,632 to 792,952 10399 mRNA_2032: 10400 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 794,820 to 796,212 10400 mRNA_2033: 10401 - K09595 HM13 minor histocompatibility antigen H13, at 796,887 to 798,543 10401
Group Condition mRNA_2029 mRNA_2030 mRNA_2031 mRNA_2032 mRNA_2033
10397 10398 10399 10400 10401
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.4 +0.2 -1.1 -1.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.4 +0.2 -1.2 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.2 +0.1 -0.3 -0.7
auxotrophy YNB Glucose -0.3 -0.1 +0.2 +0.3 -0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.2 +0.1 -0.5 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.1 +0.2 -0.1 -0.2
auxotrophy Dropout Complete -0.4 -0.1 +0.3 -0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.1 +0.2 +0.3 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.3 -0.1 +0.5 -1.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.0 +0.3 -0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.4 -0.1 -0.0 +0.1 -0.4
growth on ypd YPD -0.1 +0.4 -0.1 -0.2 -0.0
growth on oleic acid YNB Oleic Acid -0.4 +0.1 +0.1 +0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.0 +0.1 +0.3 -0.3
growth on ricinoleic acid YNB Glucose -0.1 -0.1 +0.0 +0.7 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 -0.1 +0.7 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.0 +0.3 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.1 +0.1 +0.0 -0.0
growth on oleic acid YNB Glucose -0.1 +0.0 +0.3 +0.4 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.2 -0.1 +0.9 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.2 +0.2 +0.5 -0.2
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