Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10399 and 10400 are separated by 1867 nucleotides10400 and 10401 are separated by 674 nucleotides10401 and 10402 are separated by 825 nucleotides10402 and 10403 are separated by 171 nucleotides mRNA_2031: 10399 - BLAST TPR-like protein [Auricularia subglabra TFB-10046..., at 792,632 to 792,952 10399 mRNA_2032: 10400 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 794,820 to 796,212 10400 mRNA_2033: 10401 - K09595 HM13 minor histocompatibility antigen H13, at 796,887 to 798,543 10401 mRNA_2034: 10402 - HMMPfam-Spherulation-specific family 4-PF12138, at 799,369 to 800,999 10402 mRNA_2035: 10403 - K14824 ERB1, BOP1 ribosome biogenesis protein ERB1, at 801,171 to 804,014 10403
Group Condition mRNA_2031 mRNA_2032 mRNA_2033 mRNA_2034 mRNA_2035
10399 10400 10401 10402 10403
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -1.1 -1.0 -0.6 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -1.2 -0.3 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.3 -0.7 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.5 -0.1 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.1 -0.2 -0.5 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.1 -0.2 -0.1 N.D.
auxotrophy YNB Glucose +0.2 +0.3 -0.9 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.1 -0.4 +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.3 -0.3 -0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.5 -1.2 +0.6 N.D.
auxotrophy Dropout Complete +0.3 -0.2 -0.2 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.0 -0.0 +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.3 -0.4 +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.2 -0.0 +0.1 N.D.
growth on ypd YPD -0.1 -0.2 -0.0 +0.7 N.D.
growth on oleic acid YNB Glucose +0.3 +0.4 +0.0 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.2 +0.0 +0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.5 -0.2 +0.4 N.D.
growth on ricinoleic acid YNB Glucose +0.0 +0.7 -0.4 +0.6 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.7 -0.0 +1.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.9 -0.1 +1.2 N.D.
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