Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10401 and 10402 are separated by 825 nucleotides10402 and 10403 are separated by 171 nucleotides10403 and 10404 are separated by 119 nucleotides10404 and 10405 are separated by 771 nucleotides mRNA_2033: 10401 - K09595 HM13 minor histocompatibility antigen H13, at 796,887 to 798,543 10401 mRNA_2034: 10402 - HMMPfam-Spherulation-specific family 4-PF12138, at 799,369 to 800,999 10402 mRNA_2035: 10403 - K14824 ERB1, BOP1 ribosome biogenesis protein ERB1, at 801,171 to 804,014 10403 mRNA_2036: 10404 - HMMPfam-Alpha and gamma adaptin binding protein p34-PF10199, at 804,134 to 805,617 10404 mRNA_2037: 10405 - Hypothetical Protein, at 806,389 to 807,325 10405
Group Condition mRNA_2033 mRNA_2034 mRNA_2035 mRNA_2036 mRNA_2037
10401 10402 10403 10404 10405
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 -0.6 N.D. -0.5 -0.6
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.2 N.D. -1.4 -0.1
auxotrophy Dropout Complete -0.2 +0.2 N.D. -1.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.4 N.D. -0.7 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 N.D. -0.6 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 -0.2 N.D. +0.2 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.3 N.D. -0.4 -0.1
auxotrophy YNB Glucose -0.9 +0.1 N.D. +0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.2 N.D. -0.5 +0.0
growth on oleic acid YNB Glucose +0.0 -0.1 N.D. -0.3 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.5 N.D. +0.3 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.3 N.D. +0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -1.2 +0.6 N.D. +0.4 -0.3
growth on oleic acid YNB Oleic Acid -0.0 +0.1 N.D. -0.0 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.3 N.D. -0.6 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.4 N.D. -0.2 -0.0
growth on ypd YPD -0.0 +0.7 N.D. -0.0 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.0 N.D. +0.7 -0.2
growth on ricinoleic acid YNB Glucose -0.4 +0.6 N.D. +0.8 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +1.0 N.D. +0.3 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +1.2 N.D. +0.5 +0.3
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