Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10403 and 10404 are separated by 119 nucleotides10404 and 10405 are separated by 771 nucleotides10405 and 10406 are separated by 12 nucleotides10406 and 10407 are separated by 236 nucleotides mRNA_2035: 10403 - K14824 ERB1, BOP1 ribosome biogenesis protein ERB1, at 801,171 to 804,014 10403 mRNA_2036: 10404 - HMMPfam-Alpha and gamma adaptin binding protein p34-PF10199, at 804,134 to 805,617 10404 mRNA_2037: 10405 - Hypothetical Protein, at 806,389 to 807,325 10405 mRNA_2038: 10406 - Hypothetical Protein, at 807,338 to 808,315 10406 mRNA_2039: 10407 - KOG2895 Uncharacterized conserved protein, at 808,552 to 810,897 10407
Group Condition mRNA_2035 mRNA_2036 mRNA_2037 mRNA_2038 mRNA_2039
10403 10404 10405 10406 10407
ypd buoyancy 40 hrs High Buoyancy N.D. -1.4 -0.1 -0.3 +0.0
auxotrophy Dropout Complete N.D. -1.3 -0.3 -0.4 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.5 -0.6 -0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.6 -0.4 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.7 -0.3 -0.0 -0.2
growth on oleic acid YNB Glucose N.D. -0.3 -0.3 -0.6 +0.1
growth on oleic acid YNB Oleic Acid N.D. -0.0 -0.3 -0.7 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.3 +0.0 -0.8 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 -0.4 -0.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.4 -0.1 -0.2 -0.1
growth on ypd YPD N.D. -0.0 -0.4 -0.3 -0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 -0.0 +0.1 -0.5
auxotrophy YNB Glucose 75mM Methionine N.D. -0.6 +0.3 -0.4 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.4 -0.3 +0.2 -0.8
auxotrophy YNB Glucose 75mM Arginine N.D. -0.5 +0.0 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.3 -0.4 -0.3 +0.1
auxotrophy YNB Glucose N.D. +0.0 -0.1 +0.0 +0.3
growth on ricinoleic acid YNB Glucose N.D. +0.8 +0.0 -0.7 +0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.0 +0.1 +0.4 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.5 +0.3 -0.5 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.7 -0.2 +0.1 +0.1
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