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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10404 and 10405 are separated by 771 nucleotides
10405 and 10406 are separated by 12 nucleotides
10406 and 10407 are separated by 236 nucleotides
10407 and 10408 are separated by 333 nucleotides
mRNA_2036: 10404 - HMMPfam-Alpha and gamma adaptin binding protein p34-PF10199, at 804,134 to 805,617
10404
mRNA_2037: 10405 - Hypothetical Protein, at 806,389 to 807,325
10405
mRNA_2038: 10406 - Hypothetical Protein, at 807,338 to 808,315
10406
mRNA_2039: 10407 - KOG2895 Uncharacterized conserved protein, at 808,552 to 810,897
10407
mRNA_2040: 10408 - K11729 ACAD10 acyl-CoA dehydrogenase family member 10, at 811,231 to 813,728
10408
Group
Condition
mRNA
_2036
mRNA
_2037
mRNA
_2038
mRNA
_2039
mRNA
_2040
10404
10405
10406
10407
10408
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
+0.0
-0.8
-0.4
-2.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
+0.3
-0.5
+0.2
-2.3
ypd buoyancy
40 hrs High Buoyancy
-1.4
-0.1
-0.3
+0.0
+0.0
growth on oleic acid
YNB Oleic Acid
-0.0
-0.3
-0.7
+0.1
-0.7
auxotrophy
Dropout Complete
-1.3
-0.3
-0.4
+0.4
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
-0.4
-0.1
-0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.6
-0.2
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.7
-0.3
-0.0
-0.2
-0.1
growth on oleic acid
YNB Glucose
-0.3
-0.3
-0.6
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.6
+0.3
-0.4
+0.1
-0.3
growth on ypd
YPD
-0.0
-0.4
-0.3
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.4
-0.1
-0.5
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.0
+0.1
-0.5
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.4
-0.1
-0.2
-0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.5
+0.0
-0.0
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
-0.4
-0.3
+0.1
+0.0
auxotrophy
YNB Glucose
+0.0
-0.1
+0.0
+0.3
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.1
+0.4
-0.1
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
-0.3
+0.2
-0.8
+0.7
growth on ricinoleic acid
YNB Glucose
+0.8
+0.0
-0.7
+0.3
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.7
-0.2
+0.1
+0.1
+0.0
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