Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10404 and 10405 are separated by 771 nucleotides10405 and 10406 are separated by 12 nucleotides10406 and 10407 are separated by 236 nucleotides10407 and 10408 are separated by 333 nucleotides mRNA_2036: 10404 - HMMPfam-Alpha and gamma adaptin binding protein p34-PF10199, at 804,134 to 805,617 10404 mRNA_2037: 10405 - Hypothetical Protein, at 806,389 to 807,325 10405 mRNA_2038: 10406 - Hypothetical Protein, at 807,338 to 808,315 10406 mRNA_2039: 10407 - KOG2895 Uncharacterized conserved protein, at 808,552 to 810,897 10407 mRNA_2040: 10408 - K11729 ACAD10 acyl-CoA dehydrogenase family member 10, at 811,231 to 813,728 10408
Group Condition mRNA_2036 mRNA_2037 mRNA_2038 mRNA_2039 mRNA_2040
10404 10405 10406 10407 10408
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.0 -0.8 -0.4 -2.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 +0.3 -0.5 +0.2 -2.3
ypd buoyancy 40 hrs High Buoyancy -1.4 -0.1 -0.3 +0.0 +0.0
growth on oleic acid YNB Oleic Acid -0.0 -0.3 -0.7 +0.1 -0.7
auxotrophy Dropout Complete -1.3 -0.3 -0.4 +0.4 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -0.4 -0.1 -0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.6 -0.2 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 -0.3 -0.0 -0.2 -0.1
growth on oleic acid YNB Glucose -0.3 -0.3 -0.6 +0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.6 +0.3 -0.4 +0.1 -0.3
growth on ypd YPD -0.0 -0.4 -0.3 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.4 -0.1 -0.5 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 +0.1 -0.5 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.1 -0.2 -0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.5 +0.0 -0.0 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.4 -0.3 +0.1 +0.0
auxotrophy YNB Glucose +0.0 -0.1 +0.0 +0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.1 +0.4 -0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.3 +0.2 -0.8 +0.7
growth on ricinoleic acid YNB Glucose +0.8 +0.0 -0.7 +0.3 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 -0.2 +0.1 +0.1 +0.0
remove
mRNA_2036
plot
remove
mRNA_2037
plot
remove
mRNA_2038
remove
mRNA_2039
plot
remove
mRNA_2040
plot