Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10405 and 10406 are separated by 12 nucleotides10406 and 10407 are separated by 236 nucleotides10407 and 10408 are separated by 333 nucleotides10408 and 10409 are separated by 1527 nucleotides mRNA_2037: 10405 - Hypothetical Protein, at 806,389 to 807,325 10405 mRNA_2038: 10406 - Hypothetical Protein, at 807,338 to 808,315 10406 mRNA_2039: 10407 - KOG2895 Uncharacterized conserved protein, at 808,552 to 810,897 10407 mRNA_2040: 10408 - K11729 ACAD10 acyl-CoA dehydrogenase family member 10, at 811,231 to 813,728 10408 mRNA_2041: 10409 - HMMPfam-SAM domain (Sterile alpha motif)-PF00536,ProSiteProfiles-SAM domain profile.-PS50105,SUPERFAMILY--SSF47769, at 815,256 to 815,459 10409
Group Condition mRNA_2037 mRNA_2038 mRNA_2039 mRNA_2040 mRNA_2041
10405 10406 10407 10408 10409
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.8 -0.4 -2.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.5 +0.2 -2.3 N.D.
growth on oleic acid YNB Oleic Acid -0.3 -0.7 +0.1 -0.7 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.1 -0.5 -0.0 N.D.
growth on oleic acid YNB Glucose -0.3 -0.6 +0.1 -0.1 N.D.
growth on ypd YPD -0.4 -0.3 -0.0 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.2 -0.1 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.1 -0.2 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.0 -0.2 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.3 +0.1 +0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.1 -0.5 -0.2 N.D.
growth on ricinoleic acid YNB Glucose +0.0 -0.7 +0.3 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.3 +0.0 +0.0 N.D.
auxotrophy Dropout Complete -0.3 -0.4 +0.4 +0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.4 +0.1 -0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.2 -0.8 +0.7 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 -0.1 +0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.0 -0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.1 +0.1 +0.0 N.D.
auxotrophy YNB Glucose -0.1 +0.0 +0.3 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.4 -0.1 -0.3 N.D.
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