Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10407 and 10408 are separated by 333 nucleotides10408 and 10409 are separated by 1527 nucleotides10409 and 10410 are separated by 3120 nucleotides10410 and 10411 are separated by 924 nucleotides mRNA_2039: 10407 - KOG2895 Uncharacterized conserved protein, at 808,552 to 810,897 10407 mRNA_2040: 10408 - K11729 ACAD10 acyl-CoA dehydrogenase family member 10, at 811,231 to 813,728 10408 mRNA_2041: 10409 - HMMPfam-SAM domain (Sterile alpha motif)-PF00536,ProSiteProfiles-SAM domain profile.-PS50105,SUPERFAMILY--SSF47769, at 815,256 to 815,459 10409 mRNA_2042: 10410 - K11228 STE11 mitogen-activated protein kinase kinase kinase, at 818,580 to 819,652 10410 mRNA_2043: 10411 - Hypothetical Protein, at 820,577 to 820,768 10411
Group Condition mRNA_2039 mRNA_2040 mRNA_2041 mRNA_2042 mRNA_2043
10407 10408 10409 10410 10411
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -2.2 N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -2.3 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.2 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.1 -0.7 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.0 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.3 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 N.D. N.D. N.D.
growth on ypd YPD -0.0 -0.1 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.3 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 +0.7 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.1 N.D. N.D. N.D.
growth on oleic acid YNB Glucose +0.1 -0.1 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.0 N.D. N.D. N.D.
auxotrophy YNB Glucose +0.3 -0.2 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.0 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.0 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.3 +0.0 N.D. N.D. N.D.
auxotrophy Dropout Complete +0.4 +0.0 N.D. N.D. N.D.
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