Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10415 and 10416 are separated by 348 nucleotides10416 and 10417 are separated by 710 nucleotides10417 and 10418 are separated by 698 nucleotides10418 and 10419 are separated by 328 nucleotides mRNA_2047: 10415 - HMMPfam-Spo12 family-PF05032, at 830,118 to 830,933 10415 mRNA_2048: 10416 - Hypothetical Protein, at 831,282 to 832,133 10416 mRNA_2049: 10417 - K07565 NIP7 60S ribosome subunit biogenesis protein NIP7, at 832,844 to 834,374 10417 mRNA_2050: 10418 - K02725 PSMA1 20S proteasome subunit alpha 6, at 835,073 to 836,370 10418 mRNA_2051: 10419 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 836,699 to 837,795 10419
Group Condition mRNA_2047 mRNA_2048 mRNA_2049 mRNA_2050 mRNA_2051
10415 10416 10417 10418 10419
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.1 N.D. N.D. -0.4
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.9 N.D. N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 N.D. N.D. -0.2
growth on ypd YPD N.D. -0.2 N.D. N.D. -0.3
growth on oleic acid YNB Glucose N.D. +0.1 N.D. N.D. -0.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.3 N.D. N.D. -0.0
growth on ricinoleic acid YNB Glucose N.D. +0.2 N.D. N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 N.D. N.D. -0.3
auxotrophy YNB Glucose N.D. +0.2 N.D. N.D. -0.3
ypd buoyancy 40 hrs High Buoyancy N.D. +0.0 N.D. N.D. -0.1
auxotrophy Dropout Complete N.D. +0.2 N.D. N.D. -0.3
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 N.D. N.D. -0.2
growth on oleic acid YNB Oleic Acid N.D. +0.3 N.D. N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 N.D. N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 N.D. N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.7 N.D. N.D. -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 N.D. N.D. +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.5 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.4 N.D. N.D. +0.5
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +1.1 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.3 N.D. N.D. +0.8
remove
mRNA_2047
plot		 remove
mRNA_2048
plot		 remove
mRNA_2049		 remove
mRNA_2050
plot		 remove
mRNA_2051
plot