Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10418 and 10419 are separated by 328 nucleotides10419 and 10420 are separated by 913 nucleotides10420 and 10421 are separated by 269 nucleotides10421 and 10422 are separated by 194 nucleotides mRNA_2050: 10418 - K02725 PSMA1 20S proteasome subunit alpha 6, at 835,073 to 836,370 10418 mRNA_2051: 10419 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 836,699 to 837,795 10419 mRNA_2052: 10420 - KOG1399 Flavin-containing monooxygenase, at 838,709 to 841,749 10420 mRNA_2053: 10421 - KOG2450 Aldehyde dehydrogenase, at 842,019 to 844,467 10421 mRNA_2054: 10422 - KOG1994 Predicted RNA binding protein, contains G-patch and Zn-finger domains, at 844,662 to 846,096 10422
Group Condition mRNA_2050 mRNA_2051 mRNA_2052 mRNA_2053 mRNA_2054
10418 10419 10420 10421 10422
growth on oleic acid YNB Oleic Acid N.D. -0.3 -0.4 -0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 -0.1 -0.4 -0.1
growth on ricinoleic acid YNB Glucose N.D. -0.4 -0.1 -0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.4 +0.1 +0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 +0.0 -0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 +0.2 +0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 -0.1 -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 +0.0 -0.1 -0.1
growth on oleic acid YNB Glucose N.D. -0.5 +0.1 -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 +0.1 -0.0 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.0 +0.2 +0.0 -0.2
growth on ypd YPD N.D. -0.3 +0.1 -0.1 +0.5
auxotrophy Dropout Complete N.D. -0.3 +0.2 +0.1 +0.3
auxotrophy YNB Glucose N.D. -0.3 +0.0 +0.2 +0.4
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 +0.2 +0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 +0.1 +0.2 +0.0
auxotrophy YNB Glucose 75mM Arginine N.D. -0.3 +0.4 -0.0 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.3 +0.1 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.8 -0.1 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.6 -0.1 -0.0 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.5 +0.2 +0.2 +0.5
remove
mRNA_2050
plot
remove
mRNA_2051
plot
remove
mRNA_2052
remove
mRNA_2053
plot
remove
mRNA_2054
plot