Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10419 and 10420 are separated by 913 nucleotides
10420 and 10421 are separated by 269 nucleotides
10421 and 10422 are separated by 194 nucleotides
10422 and 10423 are separated by 146 nucleotides
mRNA_2051: 10419 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 836,699 to 837,795
10419
mRNA_2052: 10420 - KOG1399 Flavin-containing monooxygenase, at 838,709 to 841,749
10420
mRNA_2053: 10421 - KOG2450 Aldehyde dehydrogenase, at 842,019 to 844,467
10421
mRNA_2054: 10422 - KOG1994 Predicted RNA binding protein, contains G-patch and Zn-finger domains, at 844,662 to 846,096
10422
mRNA_2055: 10423 - KOG2817 Predicted E3 ubiquitin ligase, at 846,243 to 848,116
10423
Group
Condition
mRNA
_2051
mRNA
_2052
mRNA
_2053
mRNA
_2054
mRNA
_2055
10419
10420
10421
10422
10423
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.2
+0.1
-0.3
-2.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
+0.1
+0.1
-0.3
-2.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.1
-0.4
-0.1
-0.5
growth on oleic acid
YNB Oleic Acid
-0.3
-0.4
-0.1
-0.3
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.2
+0.0
-0.2
-0.9
growth on ricinoleic acid
YNB Glucose
-0.4
-0.1
-0.2
-0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.1
-0.0
-0.1
-0.5
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.0
-0.1
-0.1
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.0
-0.2
-0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
-0.0
-0.0
-0.2
growth on oleic acid
YNB Glucose
-0.5
+0.1
-0.1
+0.2
+0.1
auxotrophy
Dropout Complete
-0.3
+0.2
+0.1
+0.3
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.2
+0.1
+0.3
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.1
+0.2
+0.0
+0.2
growth on ypd
YPD
-0.3
+0.1
-0.1
+0.5
+0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.4
-0.0
+0.5
+0.3
auxotrophy
YNB Glucose
-0.3
+0.0
+0.2
+0.4
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.6
-0.1
-0.0
+0.4
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+0.1
+0.1
+0.1
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.8
-0.1
+0.0
+0.2
+0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
+0.2
+0.2
+0.5
+0.4
remove
mRNA_2051
plot
remove
mRNA_2052
plot
remove
mRNA_2053
remove
mRNA_2054
plot
remove
mRNA_2055
plot