Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10419 and 10420 are separated by 913 nucleotides10420 and 10421 are separated by 269 nucleotides10421 and 10422 are separated by 194 nucleotides10422 and 10423 are separated by 146 nucleotides mRNA_2051: 10419 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 836,699 to 837,795 10419 mRNA_2052: 10420 - KOG1399 Flavin-containing monooxygenase, at 838,709 to 841,749 10420 mRNA_2053: 10421 - KOG2450 Aldehyde dehydrogenase, at 842,019 to 844,467 10421 mRNA_2054: 10422 - KOG1994 Predicted RNA binding protein, contains G-patch and Zn-finger domains, at 844,662 to 846,096 10422 mRNA_2055: 10423 - KOG2817 Predicted E3 ubiquitin ligase, at 846,243 to 848,116 10423
Group Condition mRNA_2051 mRNA_2052 mRNA_2053 mRNA_2054 mRNA_2055
10419 10420 10421 10422 10423
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.2 +0.1 -0.3 -2.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +0.1 +0.1 -0.3 -2.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.1 -0.4 -0.1 -0.5
growth on oleic acid YNB Oleic Acid -0.3 -0.4 -0.1 -0.3 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.2 +0.0 -0.2 -0.9
growth on ricinoleic acid YNB Glucose -0.4 -0.1 -0.2 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 -0.0 -0.1 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.0 -0.1 -0.1 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.0 -0.2 -0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 -0.0 -0.0 -0.2
growth on oleic acid YNB Glucose -0.5 +0.1 -0.1 +0.2 +0.1
auxotrophy Dropout Complete -0.3 +0.2 +0.1 +0.3 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.2 +0.1 +0.3 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 +0.2 +0.0 +0.2
growth on ypd YPD -0.3 +0.1 -0.1 +0.5 +0.5
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.4 -0.0 +0.5 +0.3
auxotrophy YNB Glucose -0.3 +0.0 +0.2 +0.4 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 -0.1 -0.0 +0.4 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.1 +0.1 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.8 -0.1 +0.0 +0.2 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.2 +0.2 +0.5 +0.4
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