Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10420 and 10421 are separated by 269 nucleotides10421 and 10422 are separated by 194 nucleotides10422 and 10423 are separated by 146 nucleotides10423 and 10424 are separated by 47 nucleotides mRNA_2052: 10420 - KOG1399 Flavin-containing monooxygenase, at 838,709 to 841,749 10420 mRNA_2053: 10421 - KOG2450 Aldehyde dehydrogenase, at 842,019 to 844,467 10421 mRNA_2054: 10422 - KOG1994 Predicted RNA binding protein, contains G-patch and Zn-finger domains, at 844,662 to 846,096 10422 mRNA_2055: 10423 - KOG2817 Predicted E3 ubiquitin ligase, at 846,243 to 848,116 10423 mRNA_2056: 10424 - K11667 INO80C, IES6 INO80 complex subunit C, at 848,164 to 849,134 10424
Group Condition mRNA_2052 mRNA_2053 mRNA_2054 mRNA_2055 mRNA_2056
10420 10421 10422 10423 10424
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.1 -0.3 -2.4 -2.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.0 -0.1 -0.5 -1.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.1 -0.3 -2.0 +0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.0 -0.2 -0.9 -0.7
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 -0.0 -0.2 -0.9
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 -0.1 -0.5 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.4 -0.1 -0.5 +0.9
growth on ricinoleic acid YNB Glucose -0.1 -0.2 -0.1 -0.1 +0.4
growth on oleic acid YNB Glucose +0.1 -0.1 +0.2 +0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.4 -0.1 -0.3 +0.0 +1.1
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.1 +0.3 +0.2 -0.3
auxotrophy Dropout Complete +0.2 +0.1 +0.3 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.0 +0.4 +0.0 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.2 +0.5 +0.4 -0.6
auxotrophy YNB Glucose 75mM Arginine +0.4 -0.0 +0.5 +0.3 -0.4
growth on ypd YPD +0.1 -0.1 +0.5 +0.5 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.2 +0.0 +0.2 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.0 +0.2 +0.5 +0.8
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.2 -0.3 -0.1 +2.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.1 +0.1 +0.4 +0.8
auxotrophy YNB Glucose +0.0 +0.2 +0.4 +0.5 +0.4
remove
mRNA_2052
plot
remove
mRNA_2053
plot
remove
mRNA_2054
remove
mRNA_2055
plot
remove
mRNA_2056
plot