Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10429 and 10430 are separated by 763 nucleotides
10430 and 10431 are separated by 399 nucleotides
10431 and 10432 are separated by 575 nucleotides
10432 and 10433 are separated by 404 nucleotides
mRNA_2061: 10429 - HMMPfam-Protein of unknown function (DUF1640)-PF07798, at 857,800 to 859,276
10429
mRNA_2062: 10430 - K06210 NMNAT nicotinamide mononucleotide adenylyltransferase, at 860,040 to 861,424
10430
mRNA_2063: 10431 - SUPERFAMILY--SSF140860, at 861,824 to 863,143
10431
mRNA_2064: 10432 - KOG3839 Lectin VIP36, involved in the transport of glycoproteins carrying high mannose-type glycans, at 863,719 to 865,833
10432
mRNA_2065: 10433 - Hypothetical Protein, at 866,238 to 867,408
10433
Group
Condition
mRNA
_2061
mRNA
_2062
mRNA
_2063
mRNA
_2064
mRNA
_2065
10429
10430
10431
10432
10433
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.7
N.D.
-0.8
+0.2
+0.6
growth on ricinoleic acid
YNB Glucose
-0.3
N.D.
-0.7
+0.1
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-1.1
N.D.
+0.2
+0.3
+0.3
auxotrophy
Dropout Complete
-0.1
N.D.
-0.1
-0.1
+0.1
auxotrophy
YNB Glucose
-0.1
N.D.
-0.1
-0.0
+0.2
growth on ypd
YPD
-0.2
N.D.
+0.1
+0.2
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
N.D.
-1.0
+0.0
+0.5
ypd buoyancy
40 hrs Low Buoyancy
+0.2
N.D.
-0.2
-0.0
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.9
N.D.
-0.5
-0.1
-0.1
growth on oleic acid
YNB Glucose
+0.2
N.D.
+0.0
-0.0
+0.1
growth on oleic acid
YNB Oleic Acid
+0.3
N.D.
+0.3
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
N.D.
-0.1
+0.1
+0.4
auxotrophy
YNB Glucose 75mM Methionine
+0.2
N.D.
+0.2
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.7
N.D.
-0.4
+0.1
+0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.5
N.D.
+0.1
-0.0
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.8
N.D.
+1.0
+0.3
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
N.D.
+0.3
+0.3
+0.5
auxotrophy
YNB Glucose 75mM Arginine
+0.7
N.D.
+0.1
-0.0
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
N.D.
-0.2
+0.4
+0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
N.D.
+0.4
+0.2
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
N.D.
+1.8
+0.1
+0.1
remove
mRNA_2061
plot
remove
mRNA_2062
plot
remove
mRNA_2063
remove
mRNA_2064
plot
remove
mRNA_2065
plot