Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10430 and 10431 are separated by 399 nucleotides10431 and 10432 are separated by 575 nucleotides10432 and 10433 are separated by 404 nucleotides10433 and 10434 are separated by 196 nucleotides mRNA_2062: 10430 - K06210 NMNAT nicotinamide mononucleotide adenylyltransferase, at 860,040 to 861,424 10430 mRNA_2063: 10431 - SUPERFAMILY--SSF140860, at 861,824 to 863,143 10431 mRNA_2064: 10432 - KOG3839 Lectin VIP36, involved in the transport of glycoproteins carrying high mannose-type glycans, at 863,719 to 865,833 10432 mRNA_2065: 10433 - Hypothetical Protein, at 866,238 to 867,408 10433 mRNA_2066: 10434 - SUPERFAMILY--SSF52047, at 867,605 to 868,583 10434
Group Condition mRNA_2062 mRNA_2063 mRNA_2064 mRNA_2065 mRNA_2066
10430 10431 10432 10433 10434
growth on ricinoleic acid YNB Glucose N.D. -0.7 +0.1 +0.4 -0.3
ypd buoyancy 40 hrs High Buoyancy N.D. -0.5 -0.1 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 +0.1 +0.4 -0.7
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 -0.0 +0.2 -0.6
auxotrophy YNB Glucose N.D. -0.1 -0.0 +0.2 -0.2
auxotrophy Dropout Complete N.D. -0.1 -0.1 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.4 +0.1 +0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.8 +0.2 +0.6 +0.0
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 -0.1 +0.3 -0.5
growth on oleic acid YNB Glucose N.D. +0.0 -0.0 +0.1 -0.0
growth on ypd YPD N.D. +0.1 +0.2 -0.2 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.0 +0.0 +0.5 +0.7
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 -0.0 +0.2 +0.3
growth on oleic acid YNB Oleic Acid N.D. +0.3 -0.0 -0.2 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 -0.0 +0.1 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 +0.4 +0.8 -0.5
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 +0.3 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.4 +0.2 +0.5 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.3 +0.3 +0.5 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +1.8 +0.1 +0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. +1.0 +0.3 +0.4 +0.4
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