Fitness for 3 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10437 and 10438 are separated by 260 nucleotides10438 and 10439 are separated by 590 nucleotides mRNA_2069: 10437 - K03039 PSMD13, RPN9 26S proteasome regulatory subunit N9, at 1,235 to 2,339 10437 mRNA_2070: 10438 - Hypothetical Protein, at 2,600 to 2,887 10438 mRNA_2071: 10439 - HMMPfam-Chromate transporter-PF02417, at 3,478 to 5,448 10439
Group Condition mRNA_2069 mRNA_2070 mRNA_2071
10437 10438 10439
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.9 N.D.
growth on ypd YPD N.D. -0.4 N.D.
auxotrophy YNB Glucose N.D. -0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 N.D.
auxotrophy Dropout Complete N.D. -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.2 N.D.
growth on oleic acid YNB Glucose N.D. +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.4 N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.4 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.5 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.6 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.7 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.7 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.8 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.8 N.D.
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