Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10438 and 10439 are separated by 590 nucleotides10439 and 10440 are separated by 2178 nucleotides10440 and 10441 are separated by 265 nucleotides10441 and 10442 are separated by 302 nucleotides mRNA_2070: 10438 - Hypothetical Protein, at 2,600 to 2,887 10438 mRNA_2071: 10439 - HMMPfam-Chromate transporter-PF02417, at 3,478 to 5,448 10439 mRNA_2072: 10440 - KOG2908 26S proteasome regulatory complex, subunit RPN9/PSMD13, at 7,627 to 8,732 10440 mRNA_2073: 10441 - Hypothetical Protein, at 8,998 to 9,576 10441 mRNA_2074: 10442 - HMMPfam-Chromate transporter-PF02417, at 9,879 to 11,848 10442
Group Condition mRNA_2070 mRNA_2071 mRNA_2072 mRNA_2073 mRNA_2074
10438 10439 10440 10441 10442
growth on ypd YPD -0.4 N.D. -1.1 +0.2 -0.0
auxotrophy Dropout Complete -0.1 N.D. -1.2 +0.1 +0.1
auxotrophy YNB Glucose -0.4 N.D. -0.5 +0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. -1.0 -0.4 +1.0
facs on lipid accumulation Sorted High BODIPY Gate -0.9 N.D. -0.4 +0.4 +0.6
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. -0.2 +0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 N.D. -0.4 -0.0 +0.3
growth on ricinoleic acid YNB Glucose +0.2 N.D. -0.4 +0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. -0.6 +0.5 +0.6
growth on oleic acid YNB Oleic Acid +0.4 N.D. -0.6 +0.4 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. +0.7 -0.3 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 N.D. -0.8 +0.7 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.8 N.D. -0.7 +0.4 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.6 N.D. -0.7 +0.6 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 N.D. -0.5 +0.1 +0.9
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 N.D. +1.0 -1.2 +0.7
ypd buoyancy 40 hrs Median Buoyancy +0.3 N.D. +0.1 -0.0 +0.8
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 N.D. +0.6 -0.3 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.8 N.D. -0.5 +0.4 +0.8
growth on oleic acid YNB Glucose +0.2 N.D. +0.5 +0.5 +0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 N.D. +0.1 +1.0 +0.1
remove
mRNA_2070
plot
remove
mRNA_2071
plot
remove
mRNA_2072
remove
mRNA_2073
plot
remove
mRNA_2074
plot