Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10438 and 10439 are separated by 590 nucleotides
10439 and 10440 are separated by 2178 nucleotides
10440 and 10441 are separated by 265 nucleotides
10441 and 10442 are separated by 302 nucleotides
mRNA_2070: 10438 - Hypothetical Protein, at 2,600 to 2,887
10438
mRNA_2071: 10439 - HMMPfam-Chromate transporter-PF02417, at 3,478 to 5,448
10439
mRNA_2072: 10440 - KOG2908 26S proteasome regulatory complex, subunit RPN9/PSMD13, at 7,627 to 8,732
10440
mRNA_2073: 10441 - Hypothetical Protein, at 8,998 to 9,576
10441
mRNA_2074: 10442 - HMMPfam-Chromate transporter-PF02417, at 9,879 to 11,848
10442
Group
Condition
mRNA
_2070
mRNA
_2071
mRNA
_2072
mRNA
_2073
mRNA
_2074
10438
10439
10440
10441
10442
growth on ypd
YPD
-0.4
N.D.
-1.1
+0.2
-0.0
auxotrophy
Dropout Complete
-0.1
N.D.
-1.2
+0.1
+0.1
auxotrophy
YNB Glucose
-0.4
N.D.
-0.5
+0.1
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
N.D.
-1.0
-0.4
+1.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.9
N.D.
-0.4
+0.4
+0.6
auxotrophy
YNB Glucose 75mM Arginine
-0.2
N.D.
-0.2
+0.0
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.0
N.D.
-0.4
-0.0
+0.3
growth on ricinoleic acid
YNB Glucose
+0.2
N.D.
-0.4
+0.3
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
N.D.
-0.6
+0.5
+0.6
growth on oleic acid
YNB Oleic Acid
+0.4
N.D.
-0.6
+0.4
+0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.2
N.D.
+0.7
-0.3
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.7
N.D.
-0.8
+0.7
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.8
N.D.
-0.7
+0.4
+0.3
ypd buoyancy
40 hrs High Buoyancy
+0.6
N.D.
-0.7
+0.6
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
N.D.
-0.5
+0.1
+0.9
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
N.D.
+1.0
-1.2
+0.7
ypd buoyancy
40 hrs Median Buoyancy
+0.3
N.D.
+0.1
-0.0
+0.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.5
N.D.
+0.6
-0.3
+0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.8
N.D.
-0.5
+0.4
+0.8
growth on oleic acid
YNB Glucose
+0.2
N.D.
+0.5
+0.5
+0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.7
N.D.
+0.1
+1.0
+0.1
remove
mRNA_2070
plot
remove
mRNA_2071
plot
remove
mRNA_2072
remove
mRNA_2073
plot
remove
mRNA_2074
plot