Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10440 and 10441 are separated by 265 nucleotides10441 and 10442 are separated by 302 nucleotides10442 and 10443 are separated by 1376 nucleotides10443 and 10444 are separated by 491 nucleotides mRNA_2072: 10440 - KOG2908 26S proteasome regulatory complex, subunit RPN9/PSMD13, at 7,627 to 8,732 10440 mRNA_2073: 10441 - Hypothetical Protein, at 8,998 to 9,576 10441 mRNA_2074: 10442 - HMMPfam-Chromate transporter-PF02417, at 9,879 to 11,848 10442 mRNA_2075: 10443 - ProSiteProfiles-VWFA domain profile.-PS50234,SUPERFAMILY--SSF53300, at 13,225 to 14,495 10443 mRNA_2076: 10444 - K15073 UFO1 ubiquitin ligase complex F-box protein UFO1, at 14,987 to 18,739 10444
Group Condition mRNA_2072 mRNA_2073 mRNA_2074 mRNA_2075 mRNA_2076
10440 10441 10442 10443 10444
auxotrophy Dropout Complete -1.2 +0.1 +0.1 +0.2 -0.1
growth on ypd YPD -1.1 +0.2 -0.0 +0.3 +0.0
auxotrophy YNB Glucose -0.5 +0.1 +0.1 +0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 -0.4 +1.0 +0.1 +0.0
growth on oleic acid YNB Oleic Acid -0.6 +0.4 +0.0 -0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.0 +0.1 +0.1 -0.2
growth on ricinoleic acid YNB Glucose -0.4 +0.3 -0.1 +0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.0 +0.3 +0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.7 +0.6 +0.3 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 +0.4 +0.3 -0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.7 -0.3 +0.0 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 +0.7 +0.1 -0.1 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.6 +0.5 +0.6 +0.1 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.1 +0.9 +0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.4 +0.6 +0.0 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 +0.8 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 -0.3 +0.5 +0.1 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +1.0 -1.2 +0.7 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.4 +0.8 -0.0 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +1.0 +0.1 -0.3 +0.3
growth on oleic acid YNB Glucose +0.5 +0.5 +0.7 +0.3 +0.2
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