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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10441 and 10442 are separated by 302 nucleotides
10442 and 10443 are separated by 1376 nucleotides
10443 and 10444 are separated by 491 nucleotides
10444 and 10445 are separated by 360 nucleotides
mRNA_2073: 10441 - Hypothetical Protein, at 8,998 to 9,576
10441
mRNA_2074: 10442 - HMMPfam-Chromate transporter-PF02417, at 9,879 to 11,848
10442
mRNA_2075: 10443 - ProSiteProfiles-VWFA domain profile.-PS50234,SUPERFAMILY--SSF53300, at 13,225 to 14,495
10443
mRNA_2076: 10444 - K15073 UFO1 ubiquitin ligase complex F-box protein UFO1, at 14,987 to 18,739
10444
mRNA_2077: 10445 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 19,100 to 20,228
10445
Group
Condition
mRNA
_2073
mRNA
_2074
mRNA
_2075
mRNA
_2076
mRNA
_2077
10441
10442
10443
10444
10445
ypd buoyancy
40 hrs Low Buoyancy
-0.3
+0.0
-0.1
-0.1
-0.2
auxotrophy
YNB Glucose
+0.1
+0.1
+0.0
-0.2
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.1
+0.1
-0.2
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-1.2
+0.7
+0.2
+0.3
+0.1
growth on ricinoleic acid
YNB Glucose
+0.3
-0.1
+0.1
-0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.5
+0.1
+0.0
-0.1
auxotrophy
Dropout Complete
+0.1
+0.1
+0.2
-0.1
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.3
+0.3
-0.2
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
+1.0
+0.1
+0.0
-0.3
growth on ypd
YPD
+0.2
-0.0
+0.3
+0.0
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.8
-0.1
-0.1
+0.0
growth on oleic acid
YNB Oleic Acid
+0.4
+0.0
-0.1
+0.0
+0.3
ypd buoyancy
40 hrs High Buoyancy
+0.6
+0.3
-0.0
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.3
-0.1
+0.3
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.0
+0.1
-0.3
+0.3
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.7
+0.1
-0.1
+0.4
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
+0.6
+0.0
+0.2
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
+0.6
+0.1
+0.0
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.9
+0.2
-0.0
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
+0.8
-0.0
+0.4
+0.3
growth on oleic acid
YNB Glucose
+0.5
+0.7
+0.3
+0.2
+0.3
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