Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10442 and 10443 are separated by 1376 nucleotides10443 and 10444 are separated by 491 nucleotides10444 and 10445 are separated by 360 nucleotides10445 and 10446 are separated by 237 nucleotides mRNA_2074: 10442 - HMMPfam-Chromate transporter-PF02417, at 9,879 to 11,848 10442 mRNA_2075: 10443 - ProSiteProfiles-VWFA domain profile.-PS50234,SUPERFAMILY--SSF53300, at 13,225 to 14,495 10443 mRNA_2076: 10444 - K15073 UFO1 ubiquitin ligase complex F-box protein UFO1, at 14,987 to 18,739 10444 mRNA_2077: 10445 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 19,100 to 20,228 10445 mRNA_2078: 10446 - K10773 NTH endonuclease III, at 20,466 to 22,211 10446
Group Condition mRNA_2074 mRNA_2075 mRNA_2076 mRNA_2077 mRNA_2078
10442 10443 10444 10445 10446
auxotrophy YNB Glucose +0.1 +0.0 -0.2 -0.0 -0.5
growth on ricinoleic acid YNB Glucose -0.1 +0.1 -0.1 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.1 -0.1 -0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 -0.2 +0.0 -0.2
growth on ypd YPD -0.0 +0.3 +0.0 +0.0 -0.4
growth on oleic acid YNB Oleic Acid +0.0 -0.1 +0.0 +0.3 -0.4
auxotrophy Dropout Complete +0.1 +0.2 -0.1 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.1 +0.4 +0.0 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.0 -0.2 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.3 +0.3 -0.2 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.1 +0.3 +0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 +0.1 +0.0 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.3 -0.2 +0.0 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.6 +0.0 +0.2 +0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 +0.2 +0.3 +0.1 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate +1.0 +0.1 +0.0 -0.3 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.8 -0.1 -0.1 +0.0 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.6 +0.1 +0.0 +0.2 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.9 +0.2 -0.0 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.8 -0.0 +0.4 +0.3 -0.0
growth on oleic acid YNB Glucose +0.7 +0.3 +0.2 +0.3 -0.1
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