Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10447 and 10448 are separated by 1266 nucleotides10448 and 10449 overlap by 7 nucleotides10449 and 10450 are separated by 333 nucleotides10450 and 10451 are separated by 1023 nucleotides mRNA_2079: 10447 - Hypothetical Protein, at 22,579 to 23,856 10447 mRNA_2080: 10448 - Hypothetical Protein, at 25,123 to 25,584 10448 mRNA_2081: 10449 - BLAST 163.m06341p [Cryptococcus neoformans], at 25,578 to 27,560 10449 mRNA_2082: 10450 - Hypothetical Protein, at 27,894 to 29,242 10450 mRNA_2083: 10451 - K06276 PDPK1 3-phosphoinositide dependent protein kinase-1, at 30,266 to 34,170 10451
Group Condition mRNA_2079 mRNA_2080 mRNA_2081 mRNA_2082 mRNA_2083
10447 10448 10449 10450 10451
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.2 +0.2 +0.6 -2.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 +0.1 -0.3 -0.7 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 +0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.0 -0.2 +0.6 -0.5
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.1 +0.1 +0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.6 +0.3 +0.9 -0.4 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.2 -0.0 +0.5 -0.8
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.3 +0.8 -0.7 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.2 +0.1 +0.2 +0.1
auxotrophy Dropout Complete -0.5 +0.3 +0.8 -0.2 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.2 -0.8 +0.0 +1.0
auxotrophy YNB Glucose -0.1 +0.2 +0.9 -0.5 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 +0.1 +0.1 +0.5 -0.5
growth on oleic acid YNB Oleic Acid -0.3 +0.2 +0.3 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 +0.1 -0.1 +0.1 +0.1
growth on ypd YPD +0.4 +0.4 +0.1 -0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.1 +0.3 +0.9 -0.7
growth on ricinoleic acid YNB Glucose +0.6 +0.1 +0.5 -0.8 +0.5
growth on oleic acid YNB Glucose -0.0 +0.1 +0.7 +0.2 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.4 +0.2 -0.2 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.1 +0.3 +0.4 +0.1
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