Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10448 and 10449 overlap by 7 nucleotides10449 and 10450 are separated by 333 nucleotides10450 and 10451 are separated by 1023 nucleotides10451 and 10452 are separated by 519 nucleotides mRNA_2080: 10448 - Hypothetical Protein, at 25,123 to 25,584 10448 mRNA_2081: 10449 - BLAST 163.m06341p [Cryptococcus neoformans], at 25,578 to 27,560 10449 mRNA_2082: 10450 - Hypothetical Protein, at 27,894 to 29,242 10450 mRNA_2083: 10451 - K06276 PDPK1 3-phosphoinositide dependent protein kinase-1, at 30,266 to 34,170 10451 mRNA_2084: 10452 - KOG0254 Predicted transporter (major facilitator superfamily), at 34,690 to 37,198 10452
Group Condition mRNA_2080 mRNA_2081 mRNA_2082 mRNA_2083 mRNA_2084
10448 10449 10450 10451 10452
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.2 +0.6 -2.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.3 -0.7 -0.1 +0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 +0.2 -0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.1 -0.1 -0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.0 +0.5 -0.8 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.2 +0.6 -0.5 +0.3
growth on ricinoleic acid YNB Glucose +0.1 +0.5 -0.8 +0.5 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.8 +0.0 +1.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.1 +0.1 +0.1 +0.1
growth on ypd YPD +0.4 +0.1 -0.2 +0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 +0.2 +0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.8 -0.7 +0.0 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.3 +0.9 -0.7 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.2 -0.2 +0.5 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 +0.5 -0.5 +0.5
auxotrophy YNB Glucose +0.2 +0.9 -0.5 +0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.9 -0.4 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.3 +0.4 +0.1 +0.1
growth on oleic acid YNB Oleic Acid +0.2 +0.3 +0.2 +0.3 +0.0
growth on oleic acid YNB Glucose +0.1 +0.7 +0.2 +0.2 +0.0
auxotrophy Dropout Complete +0.3 +0.8 -0.2 +0.3 +0.1
remove
mRNA_2080
plot
remove
mRNA_2081
plot
remove
mRNA_2082
remove
mRNA_2083
plot
remove
mRNA_2084
plot