Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10448 and 10449 overlap by 7 nucleotides
10449 and 10450 are separated by 333 nucleotides
10450 and 10451 are separated by 1023 nucleotides
10451 and 10452 are separated by 519 nucleotides
mRNA_2080: 10448 - Hypothetical Protein, at 25,123 to 25,584
10448
mRNA_2081: 10449 - BLAST 163.m06341p [Cryptococcus neoformans], at 25,578 to 27,560
10449
mRNA_2082: 10450 - Hypothetical Protein, at 27,894 to 29,242
10450
mRNA_2083: 10451 - K06276 PDPK1 3-phosphoinositide dependent protein kinase-1, at 30,266 to 34,170
10451
mRNA_2084: 10452 - KOG0254 Predicted transporter (major facilitator superfamily), at 34,690 to 37,198
10452
Group
Condition
mRNA
_2080
mRNA
_2081
mRNA
_2082
mRNA
_2083
mRNA
_2084
10448
10449
10450
10451
10452
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.2
+0.6
-2.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-0.3
-0.7
-0.1
+0.4
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.1
+0.2
-0.3
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.1
-0.1
-0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.0
+0.5
-0.8
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.2
+0.6
-0.5
+0.3
growth on ricinoleic acid
YNB Glucose
+0.1
+0.5
-0.8
+0.5
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.8
+0.0
+1.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.1
+0.1
+0.1
+0.1
growth on ypd
YPD
+0.4
+0.1
-0.2
+0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.1
+0.2
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.8
-0.7
+0.0
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.3
+0.9
-0.7
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
+0.2
-0.2
+0.5
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.1
+0.5
-0.5
+0.5
auxotrophy
YNB Glucose
+0.2
+0.9
-0.5
+0.2
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.9
-0.4
-0.0
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.3
+0.4
+0.1
+0.1
growth on oleic acid
YNB Oleic Acid
+0.2
+0.3
+0.2
+0.3
+0.0
growth on oleic acid
YNB Glucose
+0.1
+0.7
+0.2
+0.2
+0.0
auxotrophy
Dropout Complete
+0.3
+0.8
-0.2
+0.3
+0.1
remove
mRNA_2080
plot
remove
mRNA_2081
plot
remove
mRNA_2082
remove
mRNA_2083
plot
remove
mRNA_2084
plot