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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10450 and 10451 are separated by 1023 nucleotides
10451 and 10452 are separated by 519 nucleotides
10452 and 10453 are separated by 1193 nucleotides
10453 and 10454 are separated by 457 nucleotides
mRNA_2082: 10450 - Hypothetical Protein, at 27,894 to 29,242
10450
mRNA_2083: 10451 - K06276 PDPK1 3-phosphoinositide dependent protein kinase-1, at 30,266 to 34,170
10451
mRNA_2084: 10452 - KOG0254 Predicted transporter (major facilitator superfamily), at 34,690 to 37,198
10452
mRNA_2085: 10453 - BLAST nucleotide-diphospho-sugar transferase [Sanghuangporu..., at 38,392 to 39,762
10453
mRNA_2086: 10454 - Hypothetical Protein, at 40,220 to 41,311
10454
Group
Condition
mRNA
_2082
mRNA
_2083
mRNA
_2084
mRNA
_2085
mRNA
_2086
10450
10451
10452
10453
10454
facs on lipid accumulation
Sorted High BODIPY Gate
+0.6
-2.1
-0.1
-0.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
-0.1
+0.4
-0.6
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.3
-0.2
-0.2
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
-0.2
+0.1
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
-0.8
+0.1
+0.2
-0.3
growth on ricinoleic acid
YNB Glucose
-0.8
+0.5
-0.3
+0.4
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.7
+0.0
+0.2
+0.2
+0.2
growth on ypd
YPD
-0.2
+0.1
-0.0
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
-0.5
+0.5
-0.4
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.0
+0.0
+0.5
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.1
-0.2
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.6
-0.5
+0.3
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.1
+0.1
-0.0
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.5
-0.1
+0.1
+0.0
auxotrophy
YNB Glucose
-0.5
+0.2
+0.1
+0.5
+0.1
growth on oleic acid
YNB Oleic Acid
+0.2
+0.3
+0.0
-0.3
-0.0
growth on oleic acid
YNB Glucose
+0.2
+0.2
+0.0
-0.1
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.9
-0.7
+0.1
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.1
+0.1
+0.0
-0.0
auxotrophy
Dropout Complete
-0.2
+0.3
+0.1
+0.7
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
+1.0
-0.2
+0.2
-0.1
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