Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10451 and 10452 are separated by 519 nucleotides10452 and 10453 are separated by 1193 nucleotides10453 and 10454 are separated by 457 nucleotides10454 and 10455 are separated by 172 nucleotides mRNA_2083: 10451 - K06276 PDPK1 3-phosphoinositide dependent protein kinase-1, at 30,266 to 34,170 10451 mRNA_2084: 10452 - KOG0254 Predicted transporter (major facilitator superfamily), at 34,690 to 37,198 10452 mRNA_2085: 10453 - BLAST nucleotide-diphospho-sugar transferase [Sanghuangporu..., at 38,392 to 39,762 10453 mRNA_2086: 10454 - Hypothetical Protein, at 40,220 to 41,311 10454 mRNA_2087: 10455 - K19792 FET4 low-affinity ferrous iron transport protein, at 41,484 to 43,178 10455
Group Condition mRNA_2083 mRNA_2084 mRNA_2085 mRNA_2086 mRNA_2087
10451 10452 10453 10454 10455
facs on lipid accumulation Sorted High BODIPY Gate -2.1 -0.1 -0.1 -0.2 +0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.4 -0.6 -0.1 -0.8
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.2 -0.2 +0.1 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 +0.1 +0.2 +0.0 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.8 +0.1 +0.2 -0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 +0.1 +0.0 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.2 +0.2 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 +0.3 +0.1 -0.2 +0.2
growth on ypd YPD +0.1 -0.0 +0.1 +0.1 -0.4
growth on oleic acid YNB Oleic Acid +0.3 +0.0 -0.3 -0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.2 +0.2 +0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.1 -0.0 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 +0.5 -0.4 +0.0 +0.7
growth on oleic acid YNB Glucose +0.2 +0.0 -0.1 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.1 +0.0 -0.0 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.0 +0.5 +0.1 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +1.0 -0.2 +0.2 -0.1 -0.2
auxotrophy Dropout Complete +0.3 +0.1 +0.7 +0.1 -0.4
auxotrophy YNB Glucose +0.2 +0.1 +0.5 +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 -0.1 +0.1 +0.0 +0.4
growth on ricinoleic acid YNB Glucose +0.5 -0.3 +0.4 +0.0 +0.3
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