Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10452 and 10453 are separated by 1193 nucleotides10453 and 10454 are separated by 457 nucleotides10454 and 10455 are separated by 172 nucleotides10455 and 10456 are separated by 694 nucleotides mRNA_2084: 10452 - KOG0254 Predicted transporter (major facilitator superfamily), at 34,690 to 37,198 10452 mRNA_2085: 10453 - BLAST nucleotide-diphospho-sugar transferase [Sanghuangporu..., at 38,392 to 39,762 10453 mRNA_2086: 10454 - Hypothetical Protein, at 40,220 to 41,311 10454 mRNA_2087: 10455 - K19792 FET4 low-affinity ferrous iron transport protein, at 41,484 to 43,178 10455 mRNA_2088: 10456 - K11539 CBR4 carbonyl reductase 4, at 43,873 to 45,155 10456
Group Condition mRNA_2084 mRNA_2085 mRNA_2086 mRNA_2087 mRNA_2088
10452 10453 10454 10455 10456
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.6 -0.1 -0.8 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.2 -0.1 -0.2 -0.6
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.2 +0.1 -0.4 +0.1
growth on oleic acid YNB Oleic Acid +0.0 -0.3 -0.0 +0.1 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.2 -0.2 -0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.1 +0.0 -0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.1 +0.0 +0.4 -0.8
growth on ricinoleic acid YNB Glucose -0.3 +0.4 +0.0 +0.3 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.0 -0.0 +0.1 -0.4
growth on ypd YPD -0.0 +0.1 +0.1 -0.4 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.2 +0.2 -0.4 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.2 +0.0 -0.4 +0.2
growth on oleic acid YNB Glucose +0.0 -0.1 +0.2 +0.1 -0.1
auxotrophy Dropout Complete +0.1 +0.7 +0.1 -0.4 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.1 -0.2 +0.6 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.2 -0.3 +0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.5 +0.1 +0.0 -0.3
auxotrophy YNB Glucose +0.1 +0.5 +0.1 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.1 -0.2 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.0 -0.0 +0.1 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 -0.4 +0.0 +0.7 +0.0
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