Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10456 and 10457 are separated by 211 nucleotides10457 and 10458 are separated by 328 nucleotides10458 and 10459 are separated by 195 nucleotides10459 and 10460 are separated by 823 nucleotides mRNA_2088: 10456 - K11539 CBR4 carbonyl reductase 4, at 43,873 to 45,155 10456 mRNA_2089: 10457 - KOG0637 Sucrose transporter and related proteins, at 45,367 to 47,923 10457 mRNA_2090: 10458 - K09104 K09104 bHLH factor, other, at 48,252 to 49,306 10458 mRNA_2091: 10459 - KOG0254 Predicted transporter (major facilitator superfamily), at 49,502 to 51,805 10459 mRNA_2092: 10460 - K20457 DHFS dihydrofolate synthase, at 52,629 to 54,149 10460
Group Condition mRNA_2088 mRNA_2089 mRNA_2090 mRNA_2091 mRNA_2092
10456 10457 10458 10459 10460
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 -0.1 +0.1 -0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.3 -0.4 -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 +0.2 -0.3 -0.2 N.D.
growth on ricinoleic acid YNB Glucose -0.6 +0.2 -0.3 -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.3 -1.4 +0.1 N.D.
auxotrophy Dropout Complete -0.4 -0.5 +0.2 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.5 -0.1 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.2 -0.5 -0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.4 -0.3 +0.4 -0.3 N.D.
growth on oleic acid YNB Glucose -0.1 -0.6 +0.5 -0.2 N.D.
auxotrophy YNB Glucose -0.3 -0.2 +0.2 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.4 -0.2 -0.2 N.D.
growth on ypd YPD +0.2 -0.5 -0.1 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.3 +0.5 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +1.1 -1.0 -0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.1 -0.2 +0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.1 +0.6 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 -0.3 +0.2 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.1 -0.1 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.7 -0.3 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.0 +0.9 -0.0 N.D.
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