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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10460 and 10461 are separated by 354 nucleotides
10461 and 10462 are separated by 252 nucleotides
10462 and 10463 are separated by 286 nucleotides
10463 and 10464 are separated by 379 nucleotides
mRNA_2092: 10460 - K20457 DHFS dihydrofolate synthase, at 52,629 to 54,149
10460
mRNA_2093: 10461 - K10967 KTR1_3 alpha 1,2-mannosyltransferase, at 54,504 to 56,604
10461
mRNA_2094: 10462 - Hypothetical Protein, at 56,857 to 57,476
10462
mRNA_2095: 10463 - Hypothetical Protein, at 57,763 to 59,527
10463
mRNA_2096: 10464 - K05754 ARPC5 actin related protein 2/3 complex, subunit 5, at 59,907 to 60,818
10464
Group
Condition
mRNA
_2092
mRNA
_2093
mRNA
_2094
mRNA
_2095
mRNA
_2096
10460
10461
10462
10463
10464
auxotrophy
YNB Glucose
N.D.
-0.0
-0.7
-0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.1
-0.4
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.2
-0.3
-0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.3
-0.2
-0.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
-0.6
-0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.2
-0.3
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.1
-0.4
+0.0
N.D.
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
-0.2
-0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.1
-0.6
+0.4
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
-0.3
-0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
-0.1
-0.0
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.1
-0.1
+0.0
N.D.
auxotrophy
Dropout Complete
N.D.
-0.0
+0.2
-0.0
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.0
+0.0
+0.1
N.D.
growth on ypd
YPD
N.D.
+0.3
-0.2
+0.1
N.D.
growth on oleic acid
YNB Glucose
N.D.
+0.2
+0.1
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.2
+0.2
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.0
+0.3
+0.1
N.D.
growth on oleic acid
YNB Oleic Acid
N.D.
+0.3
+0.2
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.1
+0.4
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.3
+0.5
+0.1
N.D.
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