Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10465 and 10466 are separated by 414 nucleotides10466 and 10467 are separated by 429 nucleotides10467 and 10468 are separated by 250 nucleotides10468 and 10469 are separated by 179 nucleotides mRNA_2097: 10465 - K03217 yidC, spoIIIJ, OXA1, ccfA YidC/Oxa1 family membrane protein insertase, at 61,470 to 63,350 10465 mRNA_2098: 10466 - Hypothetical Protein, at 63,765 to 64,899 10466 mRNA_2099: 10467 - HMMPfam-PWWP domain-PF00855,SUPERFAMILY--SSF63748, at 65,329 to 67,842 10467 mRNA_2100: 10468 - K13184 DHX9 ATP-dependent RNA helicase A, at 68,093 to 72,993 10468 mRNA_2101: 10469 - K12041 SLC9A6_7, NHE6_7 solute carrier family 9 (sodium/hydrogen exchanger), member 6/7, at 73,173 to 76,460 10469
Group Condition mRNA_2097 mRNA_2098 mRNA_2099 mRNA_2100 mRNA_2101
10465 10466 10467 10468 10469
ypd buoyancy 40 hrs No Buoyancy Separation -2.8 -0.4 -0.0 N.D. -0.8
facs on lipid accumulation Sorted No BODIPY Gate -1.2 +0.4 +0.0 N.D. -0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.7 +0.3 -0.3 N.D. -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 -0.1 +0.1 N.D. -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0 -0.0 N.D. -0.7
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.2 +0.4 N.D. -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.3 +0.3 N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy +0.7 -0.2 +0.1 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.2 -0.4 N.D. +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +1.1 +0.4 +0.5 N.D. -1.3
growth on ypd YPD +1.1 -0.2 +0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.9 -0.0 +0.2 N.D. -0.2
growth on ricinoleic acid YNB Glucose -0.2 +0.6 -0.2 N.D. +0.9
growth on oleic acid YNB Oleic Acid -0.3 +0.6 +0.2 N.D. +0.8
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 +0.6 -0.5 N.D. +1.0
auxotrophy YNB Glucose 75mM Arginine +1.2 +0.3 -0.3 N.D. +0.3
auxotrophy Dropout Complete +1.1 +0.4 -0.3 N.D. +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.8 -0.4 N.D. +1.4
auxotrophy YNB Glucose +1.0 +0.4 -0.1 N.D. +0.6
growth on oleic acid YNB Glucose +0.7 +0.5 +0.2 N.D. +0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.9 +0.4 -0.3 N.D. +0.4
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