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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10469 and 10470 are separated by 324 nucleotides
10470 and 10471 are separated by 168 nucleotides
10471 and 10472 are separated by 52 nucleotides
10472 and 10473 are separated by 579 nucleotides
mRNA_2101: 10469 - K12041 SLC9A6_7, NHE6_7 solute carrier family 9 (sodium/hydrogen exchanger), member 6/7, at 73,173 to 76,460
10469
mRNA_2102: 10470 - SUPERFAMILY--SSF53067, at 76,785 to 80,345
10470
mRNA_2103: 10471 - Hypothetical Protein, at 80,514 to 81,311
10471
mRNA_2104: 10472 - KOG0101 Molecular chaperones HSP70/HSC70, HSP70 superfamily, at 81,364 to 84,462
10472
mRNA_2105: 10473 - K17991 PXG peroxygenase, at 85,042 to 86,447
10473
Group
Condition
mRNA
_2101
mRNA
_2102
mRNA
_2103
mRNA
_2104
mRNA
_2105
10469
10470
10471
10472
10473
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.3
-0.1
+0.1
-0.1
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.4
+0.1
-0.1
+0.1
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.7
+0.0
+0.1
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
+0.1
+0.0
-0.0
+0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
+0.1
+0.3
-0.3
+0.6
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
+0.1
-0.0
-0.0
+0.6
growth on ypd
YPD
-0.2
+0.2
+0.3
+0.1
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.1
+0.1
-0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.1
+0.1
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
+0.3
-0.1
+0.3
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.1
-0.1
+0.1
+0.5
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.1
+0.4
+0.0
-0.4
auxotrophy
Dropout Complete
+0.3
-0.0
+0.3
+0.1
-0.3
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.0
+0.2
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.1
-0.1
+0.0
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+1.0
-0.1
+0.3
+0.0
-0.4
growth on oleic acid
YNB Glucose
+0.7
+0.1
-0.0
+0.2
+0.1
auxotrophy
YNB Glucose
+0.6
+0.2
+0.2
+0.1
+0.1
growth on oleic acid
YNB Oleic Acid
+0.8
-0.0
+0.1
+0.3
-0.1
growth on ricinoleic acid
YNB Glucose
+0.9
+0.2
+0.0
+0.2
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.4
-0.1
+0.1
+0.1
-0.2
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