Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10472 and 10473 are separated by 579 nucleotides10473 and 10474 are separated by 326 nucleotides10474 and 10475 are separated by 705 nucleotides10475 and 10476 are separated by 221 nucleotides mRNA_2104: 10472 - KOG0101 Molecular chaperones HSP70/HSC70, HSP70 superfamily, at 81,364 to 84,462 10472 mRNA_2105: 10473 - K17991 PXG peroxygenase, at 85,042 to 86,447 10473 mRNA_2106: 10474 - K15710 SHPRH E3 ubiquitin-protein ligase SHPRH, at 86,774 to 93,150 10474 mRNA_2107: 10475 - K01918 panC pantoate--beta-alanine ligase, at 93,856 to 95,198 10475 mRNA_2108: 10476 - Hypothetical Protein, at 95,420 to 96,044 10476
Group Condition mRNA_2104 mRNA_2105 mRNA_2106 mRNA_2107 mRNA_2108
10472 10473 10474 10475 10476
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.4 +0.0 -0.3 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.2 +0.1 -0.3 -0.5
growth on ricinoleic acid YNB Glucose +0.2 +0.1 +0.0 -0.4 -0.7
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.4 +0.0 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.0 -0.1 -0.1 -0.4
auxotrophy Dropout Complete +0.1 -0.3 +0.1 -0.2 -0.4
auxotrophy YNB Glucose +0.1 +0.1 +0.0 -0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.2 -0.1 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.2 -0.0 +0.4 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 +0.0 +0.0 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 +0.1 -0.2 +0.1
growth on oleic acid YNB Oleic Acid +0.3 -0.1 +0.2 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.5 +0.1 +0.2 -0.4
growth on ypd YPD +0.1 -0.3 +0.1 +0.1 +0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.3 +0.1 +0.2 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.3 +0.1 +0.1 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.6 -0.1 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.3 +0.2 +0.3 -0.3
growth on oleic acid YNB Glucose +0.2 +0.1 +0.1 +0.2 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.6 +0.1 +0.4 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.5 +0.2 +0.4 -0.0
remove
mRNA_2104
plot
remove
mRNA_2105
plot
remove
mRNA_2106
remove
mRNA_2107
plot
remove
mRNA_2108
plot