Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10474 and 10475 are separated by 705 nucleotides10475 and 10476 are separated by 221 nucleotides10476 and 10477 are separated by 1983 nucleotides10477 and 10478 are separated by 335 nucleotides mRNA_2106: 10474 - K15710 SHPRH E3 ubiquitin-protein ligase SHPRH, at 86,774 to 93,150 10474 mRNA_2107: 10475 - K01918 panC pantoate--beta-alanine ligase, at 93,856 to 95,198 10475 mRNA_2108: 10476 - Hypothetical Protein, at 95,420 to 96,044 10476 mRNA_2109: 10477 - SUPERFAMILY--SSF56112, at 98,028 to 98,739 10477 mRNA_2110: 10478 - K10277 KDM8, JMJD5 lysine-specific demethylase 8, at 99,075 to 100,834 10478
Group Condition mRNA_2106 mRNA_2107 mRNA_2108 mRNA_2109 mRNA_2110
10474 10475 10476 10477 10478
growth on ricinoleic acid YNB Glucose +0.0 -0.4 -0.7 +0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.4 +0.1 -0.8
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.3 -0.5 -0.0 -0.3
auxotrophy Dropout Complete +0.1 -0.2 -0.4 +0.0 -0.4
auxotrophy YNB Glucose +0.0 -0.2 -0.3 +0.0 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.3 -0.5 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.2 -0.4 +0.0 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.1 -0.2 +0.1 -0.1
growth on oleic acid YNB Oleic Acid +0.2 +0.0 -0.1 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.4 -0.4 +0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 -0.1 -0.0 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.1 +0.2 +0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.2 +0.1 +0.1 +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 -0.0 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.3 -0.3 +0.1 +0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.2 -0.3 +0.0 +0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.3 +0.1 -0.2 +0.5
growth on oleic acid YNB Glucose +0.1 +0.2 +0.2 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.4 -0.0 -0.2 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.4 +0.1 +0.1 +0.2
growth on ypd YPD +0.1 +0.1 +0.5 +0.2 +0.4
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