Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10477 and 10478 are separated by 335 nucleotides10478 and 10479 are separated by 465 nucleotides10479 and 10480 are separated by 121 nucleotides10480 and 10481 are separated by 376 nucleotides mRNA_2109: 10477 - SUPERFAMILY--SSF56112, at 98,028 to 98,739 10477 mRNA_2110: 10478 - K10277 KDM8, JMJD5 lysine-specific demethylase 8, at 99,075 to 100,834 10478 mRNA_2111: 10479 - K10575 UBE2G1, UBC7 ubiquitin-conjugating enzyme E2 G1, at 101,300 to 102,530 10479 mRNA_2112: 10480 - Hypothetical Protein, at 102,652 to 103,100 10480 mRNA_2113: 10481 - KOG0015 Regulator of arginine metabolism and related MADS box-containing transcription factors, at 103,477 to 104,004 10481
Group Condition mRNA_2109 mRNA_2110 mRNA_2111 mRNA_2112 mRNA_2113
10477 10478 10479 10480 10481
auxotrophy Dropout Complete +0.0 -0.4 -2.1 +0.1 -0.1
growth on oleic acid YNB Oleic Acid +0.1 -0.3 -1.4 -0.0 -0.8
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.8 -0.9 +0.1 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.2 -2.0 +0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.6 -1.9 -0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.3 -0.9 -0.1 -0.1
auxotrophy YNB Glucose +0.0 -0.4 -0.3 +0.2 -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.1 -0.6 -0.2 +0.3
growth on ypd YPD +0.2 +0.4 -1.5 +0.2 +0.1
growth on oleic acid YNB Glucose +0.2 -0.1 +0.5 +0.1 -1.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.5 -0.1 -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.1 -0.2 +0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.2 -0.8 -0.1 +0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.3 +1.8 +0.2 -0.7
growth on ricinoleic acid YNB Glucose +0.1 -0.4 +0.6 -0.1 +1.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.3 +1.1 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.4 +1.0 +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.4 +1.1 -0.3 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.4 +1.1 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.3 +1.2 +0.5 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.4 +1.6 +0.4 +0.9
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