Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10478 and 10479 are separated by 465 nucleotides10479 and 10480 are separated by 121 nucleotides10480 and 10481 are separated by 376 nucleotides10481 and 10482 are separated by 1973 nucleotides mRNA_2110: 10478 - K10277 KDM8, JMJD5 lysine-specific demethylase 8, at 99,075 to 100,834 10478 mRNA_2111: 10479 - K10575 UBE2G1, UBC7 ubiquitin-conjugating enzyme E2 G1, at 101,300 to 102,530 10479 mRNA_2112: 10480 - Hypothetical Protein, at 102,652 to 103,100 10480 mRNA_2113: 10481 - KOG0015 Regulator of arginine metabolism and related MADS box-containing transcription factors, at 103,477 to 104,004 10481 mRNA_2114: 10482 - K10768 ALKBH6 alkylated DNA repair protein alkB homolog 6, at 105,978 to 107,393 10482
Group Condition mRNA_2110 mRNA_2111 mRNA_2112 mRNA_2113 mRNA_2114
10478 10479 10480 10481 10482
auxotrophy Dropout Complete -0.4 -2.1 +0.1 -0.1 +0.0
growth on oleic acid YNB Oleic Acid -0.3 -1.4 -0.0 -0.8 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.8 -0.9 +0.1 -0.5 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -2.0 +0.3 -0.1 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.9 -0.1 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.6 -1.9 -0.0 -0.1 +0.1
auxotrophy YNB Glucose -0.4 -0.3 +0.2 -0.8 -0.1
growth on ypd YPD +0.4 -1.5 +0.2 +0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.6 -0.2 +0.3 -0.2
growth on oleic acid YNB Glucose -0.1 +0.5 +0.1 -1.1 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2 +0.1 +0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.1 -0.2 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.8 -0.1 +0.7 +0.3
growth on ricinoleic acid YNB Glucose -0.4 +0.6 -0.1 +1.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +1.8 +0.2 -0.7 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.3 +1.1 -0.2 -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.4 +1.1 -0.3 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +1.0 +0.1 -0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.4 +1.1 +0.1 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +1.6 +0.4 +0.9 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +1.2 +0.5 +0.6 +0.2
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