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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10479 and 10480 are separated by 121 nucleotides
10480 and 10481 are separated by 376 nucleotides
10481 and 10482 are separated by 1973 nucleotides
10482 and 10483 are separated by 162 nucleotides
mRNA_2111: 10479 - K10575 UBE2G1, UBC7 ubiquitin-conjugating enzyme E2 G1, at 101,300 to 102,530
10479
mRNA_2112: 10480 - Hypothetical Protein, at 102,652 to 103,100
10480
mRNA_2113: 10481 - KOG0015 Regulator of arginine metabolism and related MADS box-containing transcription factors, at 103,477 to 104,004
10481
mRNA_2114: 10482 - K10768 ALKBH6 alkylated DNA repair protein alkB homolog 6, at 105,978 to 107,393
10482
mRNA_2115: 10483 - BLAST integral membrane protein [Stemphylium lycopersici], at 107,556 to 109,708
10483
Group
Condition
mRNA
_2111
mRNA
_2112
mRNA
_2113
mRNA
_2114
mRNA
_2115
10479
10480
10481
10482
10483
facs on lipid accumulation
Sorted No BODIPY Gate
-1.9
-0.0
-0.1
+0.1
-0.2
growth on oleic acid
YNB Oleic Acid
-1.4
-0.0
-0.8
+0.0
+0.1
auxotrophy
Dropout Complete
-2.1
+0.1
-0.1
+0.0
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.0
+0.3
-0.1
+0.2
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.9
+0.1
-0.5
+0.0
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
-0.1
-0.1
-0.1
-0.0
auxotrophy
YNB Glucose
-0.3
+0.2
-0.8
-0.1
+0.1
growth on ypd
YPD
-1.5
+0.2
+0.1
-0.2
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
-0.2
+0.3
-0.2
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.2
-0.1
-0.1
+0.0
growth on oleic acid
YNB Glucose
+0.5
+0.1
-1.1
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.1
+0.1
-0.0
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
-0.1
+0.7
+0.3
-0.0
ypd buoyancy
40 hrs High Buoyancy
+1.1
-0.3
+0.2
-0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+1.1
-0.2
-0.1
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.0
+0.1
-0.1
+0.2
-0.0
growth on ricinoleic acid
YNB Glucose
+0.6
-0.1
+1.0
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.8
+0.2
-0.7
-0.0
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+1.1
+0.1
+0.2
+0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+1.2
+0.5
+0.6
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.6
+0.4
+0.9
+0.3
-0.0
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