Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10480 and 10481 are separated by 376 nucleotides10481 and 10482 are separated by 1973 nucleotides10482 and 10483 are separated by 162 nucleotides10483 and 10484 are separated by 762 nucleotides mRNA_2112: 10480 - Hypothetical Protein, at 102,652 to 103,100 10480 mRNA_2113: 10481 - KOG0015 Regulator of arginine metabolism and related MADS box-containing transcription factors, at 103,477 to 104,004 10481 mRNA_2114: 10482 - K10768 ALKBH6 alkylated DNA repair protein alkB homolog 6, at 105,978 to 107,393 10482 mRNA_2115: 10483 - BLAST integral membrane protein [Stemphylium lycopersici], at 107,556 to 109,708 10483 mRNA_2116: 10484 - K01184 E3.2.1.15 polygalacturonase, at 110,471 to 111,882 10484
Group Condition mRNA_2112 mRNA_2113 mRNA_2114 mRNA_2115 mRNA_2116
10480 10481 10482 10483 10484
growth on oleic acid YNB Glucose +0.1 -1.1 +0.1 +0.1 +0.1
growth on oleic acid YNB Oleic Acid -0.0 -0.8 +0.0 +0.1 +0.0
auxotrophy YNB Glucose +0.2 -0.8 -0.1 +0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.5 +0.0 -0.0 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.7 -0.0 +0.1 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.1 -0.1 -0.0 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.1 -0.1 +0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.1 +0.1 -0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 +0.1 +0.0 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.2 -0.2 -0.1 +0.1
auxotrophy Dropout Complete +0.1 -0.1 +0.0 +0.0 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.3 -0.2 +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.1 -0.0 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.1 +0.2 -0.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.1 +0.2 +0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.2 +0.0 -0.0 +0.1
growth on ypd YPD +0.2 +0.1 -0.2 +0.4 +0.0
growth on ricinoleic acid YNB Glucose -0.1 +1.0 -0.2 -0.0 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.7 +0.3 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.6 +0.2 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.9 +0.3 -0.0 +0.1
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