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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10482 and 10483 are separated by 162 nucleotides
10483 and 10484 are separated by 762 nucleotides
10484 and 10485 are separated by 626 nucleotides
10485 and 10486 are separated by 97 nucleotides
mRNA_2114: 10482 - K10768 ALKBH6 alkylated DNA repair protein alkB homolog 6, at 105,978 to 107,393
10482
mRNA_2115: 10483 - BLAST integral membrane protein [Stemphylium lycopersici], at 107,556 to 109,708
10483
mRNA_2116: 10484 - K01184 E3.2.1.15 polygalacturonase, at 110,471 to 111,882
10484
mRNA_2117: 10485 - Hypothetical Protein, at 112,509 to 114,471
10485
mRNA_2118: 10486 - KOG0254 Predicted transporter (major facilitator superfamily), at 114,569 to 117,029
10486
Group
Condition
mRNA
_2114
mRNA
_2115
mRNA
_2116
mRNA
_2117
mRNA
_2118
10482
10483
10484
10485
10486
auxotrophy
YNB Glucose
-0.1
+0.1
-0.0
-0.7
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.0
+0.1
-0.1
-0.6
growth on ricinoleic acid
YNB Glucose
-0.2
-0.0
+0.0
-0.4
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.0
-0.0
-0.4
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.0
-0.0
-0.3
+0.0
auxotrophy
Dropout Complete
+0.0
+0.0
+0.1
-0.5
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.1
+0.2
-0.6
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.0
+0.0
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.0
+0.1
-0.4
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.0
+0.1
-0.2
+0.1
growth on oleic acid
YNB Glucose
+0.1
+0.1
+0.1
-0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.1
+0.1
+0.2
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.0
+0.1
+0.1
-0.1
growth on ypd
YPD
-0.2
+0.4
+0.0
-0.0
-0.1
growth on oleic acid
YNB Oleic Acid
+0.0
+0.1
+0.0
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
-0.0
+0.1
-0.2
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.0
-0.1
+0.2
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.2
+0.1
+0.3
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.0
+0.1
-0.0
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
+0.1
+0.0
+0.1
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.0
+0.2
+0.6
-0.1
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