Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10484 and 10485 are separated by 626 nucleotides
10485 and 10486 are separated by 97 nucleotides
10486 and 10487 are separated by 562 nucleotides
10487 and 10488 are separated by 697 nucleotides
mRNA_2116: 10484 - K01184 E3.2.1.15 polygalacturonase, at 110,471 to 111,882
10484
mRNA_2117: 10485 - Hypothetical Protein, at 112,509 to 114,471
10485
mRNA_2118: 10486 - KOG0254 Predicted transporter (major facilitator superfamily), at 114,569 to 117,029
10486
mRNA_2119: 10487 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 117,592 to 119,082
10487
mRNA_2120: 10488 - Hypothetical Protein, at 119,780 to 121,101
10488
Group
Condition
mRNA
_2116
mRNA
_2117
mRNA
_2118
mRNA
_2119
mRNA
_2120
10484
10485
10486
10487
10488
auxotrophy
YNB Glucose
-0.0
-0.7
+0.1
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.4
-0.1
+0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-0.1
-0.6
+0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.3
-0.1
+0.0
+0.0
auxotrophy
Dropout Complete
+0.1
-0.5
-0.0
+0.2
-0.0
growth on ricinoleic acid
YNB Glucose
+0.0
-0.4
+0.1
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.4
+0.1
+0.1
+0.2
growth on oleic acid
YNB Glucose
+0.1
-0.2
-0.1
+0.3
-0.1
growth on ypd
YPD
+0.0
-0.0
-0.1
+0.3
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.3
+0.0
+0.3
+0.1
growth on oleic acid
YNB Oleic Acid
+0.0
+0.1
+0.0
-0.0
+0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.2
+0.1
+0.3
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.6
+0.1
+0.3
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.2
-0.0
+0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.1
-0.1
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.0
+0.2
+0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.2
+0.2
+0.3
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.6
-0.1
+0.3
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.3
+0.1
+0.3
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.2
+0.1
+0.7
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.1
+0.4
+0.5
+0.1
remove
mRNA_2116
plot
remove
mRNA_2117
plot
remove
mRNA_2118
remove
mRNA_2119
plot
remove
mRNA_2120
plot