Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10484 and 10485 are separated by 626 nucleotides10485 and 10486 are separated by 97 nucleotides10486 and 10487 are separated by 562 nucleotides10487 and 10488 are separated by 697 nucleotides mRNA_2116: 10484 - K01184 E3.2.1.15 polygalacturonase, at 110,471 to 111,882 10484 mRNA_2117: 10485 - Hypothetical Protein, at 112,509 to 114,471 10485 mRNA_2118: 10486 - KOG0254 Predicted transporter (major facilitator superfamily), at 114,569 to 117,029 10486 mRNA_2119: 10487 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 117,592 to 119,082 10487 mRNA_2120: 10488 - Hypothetical Protein, at 119,780 to 121,101 10488
Group Condition mRNA_2116 mRNA_2117 mRNA_2118 mRNA_2119 mRNA_2120
10484 10485 10486 10487 10488
auxotrophy YNB Glucose -0.0 -0.7 +0.1 +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.4 -0.1 +0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.1 -0.6 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.3 -0.1 +0.0 +0.0
auxotrophy Dropout Complete +0.1 -0.5 -0.0 +0.2 -0.0
growth on ricinoleic acid YNB Glucose +0.0 -0.4 +0.1 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.4 +0.1 +0.1 +0.2
growth on oleic acid YNB Glucose +0.1 -0.2 -0.1 +0.3 -0.1
growth on ypd YPD +0.0 -0.0 -0.1 +0.3 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.3 +0.0 +0.3 +0.1
growth on oleic acid YNB Oleic Acid +0.0 +0.1 +0.0 -0.0 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.2 +0.1 +0.3 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.6 +0.1 +0.3 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 -0.0 +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 -0.1 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.0 +0.2 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.2 +0.2 +0.3 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.6 -0.1 +0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.3 +0.1 +0.3 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.2 +0.1 +0.7 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.1 +0.4 +0.5 +0.1
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