Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10485 and 10486 are separated by 97 nucleotides10486 and 10487 are separated by 562 nucleotides10487 and 10488 are separated by 697 nucleotides10488 and 10489 are separated by 483 nucleotides mRNA_2117: 10485 - Hypothetical Protein, at 112,509 to 114,471 10485 mRNA_2118: 10486 - KOG0254 Predicted transporter (major facilitator superfamily), at 114,569 to 117,029 10486 mRNA_2119: 10487 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 117,592 to 119,082 10487 mRNA_2120: 10488 - Hypothetical Protein, at 119,780 to 121,101 10488 mRNA_2121: 10489 - K17991 PXG peroxygenase, at 121,585 to 123,428 10489
Group Condition mRNA_2117 mRNA_2118 mRNA_2119 mRNA_2120 mRNA_2121
10485 10486 10487 10488 10489
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.1 +0.1 -0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.6 +0.1 -0.1 -0.2
auxotrophy YNB Glucose -0.7 +0.1 +0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.1 +0.1 +0.2 -0.4
growth on ricinoleic acid YNB Glucose -0.4 +0.1 +0.3 -0.1 -0.3
growth on oleic acid YNB Glucose -0.2 -0.1 +0.3 -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.1 +0.0 +0.0 +0.1
auxotrophy Dropout Complete -0.5 -0.0 +0.2 -0.0 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 +0.1 +0.3 +0.2 -0.3
growth on oleic acid YNB Oleic Acid +0.1 +0.0 -0.0 +0.0 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.1 +0.3 +0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.0 +0.3 +0.1 -0.2
growth on ypd YPD -0.0 -0.1 +0.3 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.2 +0.2 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.2 +0.3 +0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 +0.2 +0.0 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.0 +0.1 -0.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.6 -0.1 +0.3 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.4 +0.5 +0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.1 +0.3 +0.0 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.1 +0.7 +0.2 -0.1
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