Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10486 and 10487 are separated by 562 nucleotides10487 and 10488 are separated by 697 nucleotides10488 and 10489 are separated by 483 nucleotides10489 and 10490 are separated by 1130 nucleotides mRNA_2118: 10486 - KOG0254 Predicted transporter (major facilitator superfamily), at 114,569 to 117,029 10486 mRNA_2119: 10487 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 117,592 to 119,082 10487 mRNA_2120: 10488 - Hypothetical Protein, at 119,780 to 121,101 10488 mRNA_2121: 10489 - K17991 PXG peroxygenase, at 121,585 to 123,428 10489 mRNA_2122: 10490 - K00103 GULO L-gulonolactone oxidase, at 124,559 to 126,866 10490
Group Condition mRNA_2118 mRNA_2119 mRNA_2120 mRNA_2121 mRNA_2122
10486 10487 10488 10489 10490
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +0.1 -0.1 -0.2 -0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.3 -0.2 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 +0.2 -0.4 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.2 -0.0 -0.1 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.3 +0.2 -0.3 -0.8
growth on oleic acid YNB Glucose -0.1 +0.3 -0.1 -0.3 -0.1
growth on oleic acid YNB Oleic Acid +0.0 -0.0 +0.0 -0.4 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.0 +0.0 +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.1 -0.1 +0.3 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 -0.1 -0.3 +0.5
growth on ricinoleic acid YNB Glucose +0.1 +0.3 -0.1 -0.3 +0.1
growth on ypd YPD -0.1 +0.3 -0.0 -0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.2 +0.0 +0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.3 +0.0 +0.0 -0.1
auxotrophy YNB Glucose +0.1 +0.1 -0.1 -0.1 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.3 +0.0 -0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.3 +0.1 -0.2 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.3 +0.1 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 +0.5 +0.1 -0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.7 +0.2 -0.1 -0.2
auxotrophy Dropout Complete -0.0 +0.2 -0.0 +0.2 +0.4
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