Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10487 and 10488 are separated by 697 nucleotides10488 and 10489 are separated by 483 nucleotides10489 and 10490 are separated by 1130 nucleotides10490 and 10491 are separated by 348 nucleotides mRNA_2119: 10487 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 117,592 to 119,082 10487 mRNA_2120: 10488 - Hypothetical Protein, at 119,780 to 121,101 10488 mRNA_2121: 10489 - K17991 PXG peroxygenase, at 121,585 to 123,428 10489 mRNA_2122: 10490 - K00103 GULO L-gulonolactone oxidase, at 124,559 to 126,866 10490 mRNA_2123: 10491 - HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685, at 127,215 to 128,574 10491
Group Condition mRNA_2119 mRNA_2120 mRNA_2121 mRNA_2122 mRNA_2123
10487 10488 10489 10490 10491
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.1 -0.2 -0.7 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.2 -0.3 -0.8 -0.3
growth on oleic acid YNB Oleic Acid -0.0 +0.0 -0.4 +0.2 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.2 -0.4 -0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 +0.1 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.0 -0.1 -0.6 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.2 -0.1 -0.4 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.1 -0.2 +0.2 -0.4
growth on oleic acid YNB Glucose +0.3 -0.1 -0.3 -0.1 +0.2
growth on ricinoleic acid YNB Glucose +0.3 -0.1 -0.3 +0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 -0.3 +0.5 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.1 -0.2 +0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 +0.3 -0.2 +0.2
auxotrophy Dropout Complete +0.2 -0.0 +0.2 +0.4 -0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.0 +0.0 -0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.0 +0.2 -0.1 +0.1
auxotrophy YNB Glucose +0.1 -0.1 -0.1 +0.5 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.0 -0.2 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 +0.1 -0.3 -0.1 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 +0.2 -0.1 -0.2 +0.2
growth on ypd YPD +0.3 -0.0 -0.1 +0.0 +0.9
remove
mRNA_2119
plot
remove
mRNA_2120
plot
remove
mRNA_2121
remove
mRNA_2122
plot
remove
mRNA_2123
plot