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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10488 and 10489 are separated by 483 nucleotides
10489 and 10490 are separated by 1130 nucleotides
10490 and 10491 are separated by 348 nucleotides
10491 and 10492 are separated by 60 nucleotides
mRNA_2120: 10488 - Hypothetical Protein, at 119,780 to 121,101
10488
mRNA_2121: 10489 - K17991 PXG peroxygenase, at 121,585 to 123,428
10489
mRNA_2122: 10490 - K00103 GULO L-gulonolactone oxidase, at 124,559 to 126,866
10490
mRNA_2123: 10491 - HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685, at 127,215 to 128,574
10491
mRNA_2124: 10492 - Hypothetical Protein, at 128,635 to 129,596
10492
Group
Condition
mRNA
_2120
mRNA
_2121
mRNA
_2122
mRNA
_2123
mRNA
_2124
10488
10489
10490
10491
10492
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.2
-0.7
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.4
-0.3
+0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.1
-0.1
-0.4
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.3
-0.8
-0.3
+0.5
growth on oleic acid
YNB Oleic Acid
+0.0
-0.4
+0.2
-0.5
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.1
-0.6
+0.3
+0.2
growth on oleic acid
YNB Glucose
-0.1
-0.3
-0.1
+0.2
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.1
-0.4
+0.4
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.3
-0.2
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
-0.2
+0.1
+0.3
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.2
-0.1
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.2
+0.3
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.3
-0.1
+0.4
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.1
-0.2
+0.2
+0.2
auxotrophy
Dropout Complete
-0.0
+0.2
+0.4
-0.5
+0.3
growth on ricinoleic acid
YNB Glucose
-0.1
-0.3
+0.1
+0.2
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.2
+0.2
-0.4
+0.7
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.3
+0.5
+0.1
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.0
-0.1
+0.1
+0.3
auxotrophy
YNB Glucose
-0.1
-0.1
+0.5
+0.1
+0.3
growth on ypd
YPD
-0.0
-0.1
+0.0
+0.9
+0.4
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