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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10494 and 10495 are separated by 349 nucleotides
10495 and 10496 are separated by 469 nucleotides
10496 and 10497 are separated by 170 nucleotides
10497 and 10498 are separated by 167 nucleotides
mRNA_2126: 10494 - Hypothetical Protein, at 130,943 to 133,180
10494
mRNA_2127: 10495 - BLAST putative lipase ATG15 [Grifola frondosa], at 133,530 to 135,409
10495
mRNA_2128: 10496 - Hypothetical Protein, at 135,879 to 136,766
10496
mRNA_2129: 10497 - K17741 GRE2 NADPH-dependent methylglyoxal reductase, at 136,937 to 138,468
10497
mRNA_2130: 10498 - Hypothetical Protein, at 138,636 to 139,652
10498
Group
Condition
mRNA
_2126
mRNA
_2127
mRNA
_2128
mRNA
_2129
mRNA
_2130
10494
10495
10496
10497
10498
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.2
-0.4
-0.8
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.2
-0.4
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.0
+0.1
-0.3
-0.3
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.3
+0.2
-0.4
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.1
-0.3
-0.2
+0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.2
+0.3
-0.2
+0.1
growth on ricinoleic acid
YNB Glucose
-0.2
-0.2
-0.1
-0.2
+0.4
growth on oleic acid
YNB Glucose
-0.1
+0.1
-0.2
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.1
+0.2
-0.5
+0.2
auxotrophy
Dropout Complete
-0.3
+0.1
-0.1
-0.2
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.3
-0.2
-0.4
+0.6
growth on oleic acid
YNB Oleic Acid
+0.3
-0.2
-0.3
-0.0
+0.3
auxotrophy
YNB Glucose
-0.1
+0.1
+0.3
-0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.0
-0.3
+0.2
+0.7
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
+0.6
-0.2
+0.0
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.8
+0.1
+0.0
-0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.1
+0.3
-0.1
+0.3
growth on ypd
YPD
+0.0
+0.2
+0.5
+0.3
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.2
+0.0
+0.1
+0.6
facs on lipid accumulation
Sorted No BODIPY Gate
+0.8
+0.3
+0.2
-0.2
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
+0.1
+0.2
+0.1
+0.9
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