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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10495 and 10496 are separated by 469 nucleotides
10496 and 10497 are separated by 170 nucleotides
10497 and 10498 are separated by 167 nucleotides
10498 and 10499 are separated by 1670 nucleotides
mRNA_2127: 10495 - BLAST putative lipase ATG15 [Grifola frondosa], at 133,530 to 135,409
10495
mRNA_2128: 10496 - Hypothetical Protein, at 135,879 to 136,766
10496
mRNA_2129: 10497 - K17741 GRE2 NADPH-dependent methylglyoxal reductase, at 136,937 to 138,468
10497
mRNA_2130: 10498 - Hypothetical Protein, at 138,636 to 139,652
10498
mRNA_2131: 10499 - K09580 PDIA1, P4HB protein disulfide-isomerase A1, at 141,323 to 143,619
10499
Group
Condition
mRNA
_2127
mRNA
_2128
mRNA
_2129
mRNA
_2130
mRNA
_2131
10495
10496
10497
10498
10499
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.0
-0.1
-0.2
-3.6
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
+0.2
-0.2
-0.3
-2.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.6
-0.2
+0.0
-0.5
-1.5
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.2
-0.4
-0.2
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.4
-0.0
-0.3
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.4
-0.8
-0.2
+1.5
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.3
-0.2
+0.1
-0.0
growth on oleic acid
YNB Glucose
+0.1
-0.2
+0.1
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.1
-0.3
-0.3
+0.9
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.3
-0.2
+0.5
+0.5
growth on oleic acid
YNB Oleic Acid
-0.2
-0.3
-0.0
+0.3
+0.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
-0.2
-0.4
+0.6
+0.5
growth on ricinoleic acid
YNB Glucose
-0.2
-0.1
-0.2
+0.4
+0.8
growth on ypd
YPD
+0.2
+0.5
+0.3
-0.3
+0.2
auxotrophy
Dropout Complete
+0.1
-0.1
-0.2
+0.5
+0.8
auxotrophy
YNB Glucose
+0.1
+0.3
-0.1
-0.1
+1.2
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.0
+0.1
+0.6
+0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.2
-0.5
+0.2
+1.7
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.3
-0.1
+0.3
+1.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.3
+0.2
+0.7
+2.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.2
+0.1
+0.9
+1.9
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