Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10497 and 10498 are separated by 167 nucleotides
10498 and 10499 are separated by 1670 nucleotides
10499 and 10500 are separated by 406 nucleotides
10500 and 10501 are separated by 456 nucleotides
mRNA_2129: 10497 - K17741 GRE2 NADPH-dependent methylglyoxal reductase, at 136,937 to 138,468
10497
mRNA_2130: 10498 - Hypothetical Protein, at 138,636 to 139,652
10498
mRNA_2131: 10499 - K09580 PDIA1, P4HB protein disulfide-isomerase A1, at 141,323 to 143,619
10499
mRNA_2132: 10500 - Hypothetical Protein, at 144,026 to 145,888
10500
mRNA_2133: 10501 - ProSitePatterns-Zinc finger RanBP2-type signature.-PS01358,ProSiteProfiles-Zinc finger RanBP2 type profile.-PS50199,SMART-Zinc finger domain-SM00547,SUPERFAMILY--SSF90209, at 146,345 to 148,532
10501
Group
Condition
mRNA
_2129
mRNA
_2130
mRNA
_2131
mRNA
_2132
mRNA
_2133
10497
10498
10499
10500
10501
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.2
-3.6
-0.8
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.3
-2.2
-0.3
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.4
-0.2
-0.3
-0.1
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-0.5
-1.5
+0.0
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
-0.2
+1.5
+0.0
-1.6
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.1
-0.0
+0.2
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.3
+0.9
-0.5
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.5
+0.5
-0.1
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
+0.6
+0.5
-0.8
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.3
+0.2
+0.6
-0.2
growth on ypd
YPD
+0.3
-0.3
+0.2
-0.1
+0.2
auxotrophy
Dropout Complete
-0.2
+0.5
+0.8
-0.5
-0.1
auxotrophy
YNB Glucose
-0.1
-0.1
+1.2
-0.0
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.6
+0.7
-0.3
-0.4
growth on oleic acid
YNB Glucose
+0.1
-0.1
+0.3
-0.1
+0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
+0.2
+1.7
-0.7
+0.6
growth on oleic acid
YNB Oleic Acid
-0.0
+0.3
+0.9
-0.3
+0.5
growth on ricinoleic acid
YNB Glucose
-0.2
+0.4
+0.8
+0.0
+0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.3
+1.6
+0.3
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.9
+1.9
-0.1
+0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.7
+2.1
+0.3
+0.5
remove
mRNA_2129
plot
remove
mRNA_2130
plot
remove
mRNA_2131
remove
mRNA_2132
plot
remove
mRNA_2133
plot